Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0942 ATGGGACGTTCGCCTTGTTGCGAGAAAGCCCACACAAACAAAGGCGCTTGGACCAAAGAAGAAGACCAATGCCTTATCGATTATATTCGCCTCCATGGCGAAGGCTCTTGGCGTTCTCTCCCAAAAGCTGCTGGATTGCTCAGATGCGGAAAGAGTTGCAGATTGAGATGGATAAATTACCTTCGTCCTGATCTCAAACGAGGAAATTTCACGCAAGAAGAAGACGACCTCATCATCAAGCTTCATAGTCTACTCGGAAACAAATGGTCTTTGATTGCGGCGCGATTACCTGGTAGAACCGACAATGAGATCAAGAATTATTGGAATACTCATATAAAGCGCAAGCTCATCAGCCGTGGAATCAATCCCCAAACGCACCGTCCGTTGAACGAAACCGCCGTCTCTGTAAAATCTACCGCCGAGTGGGACTTCAAGACCTCACCTGCGGTGGAAAACGACTTCGTCGTGAAGAAGCCGAAGCCGAAGCAGGATAGTAATAGATTCAATTGCATCGATTTCGGCAGGAATATGGCGGTTGAGGATTTGACCAACACTAGTAGTGGCACCACTATTGAGGAAGAAGAACCGCCATTGTTGGAGCGAGATTCTTCGGTTCATGGTGCTGGTGGTGAGCCCAATCTGGAGCTCTCGATTGGTCTCGTGCCGTTTCACTCCGAGTCGGCTCGTACAGCGCAGGGGAAATTGGCTGAGTCAAAAATCGGGTTGGTCTTGTCGCCGGCAACGGTGACTCAAATGGCGGCGTATCGGAGTTGGCAATTCTATCTTCAGAGGTAG 795 0.4943 MGRSPCCEKAHTNKGAWTKEEDQCLIDYIRLHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQEEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGINPQTHRPLNETAVSVKSTAEWDFKTSPAVENDFVVKKPKPKQDSNRFNCIDFGRNMAVEDLTNTSSGTTIEEEEPPLLERDSSVHGAGGEPNLELSIGLVPFHSESARTAQGKLAESKIGLVLSPATVTQMAAYRSWQFYLQR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0942 264 FunFam Myb transcription factor 68 137 - -
Lele11g0942 264 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele11g0942 264 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele11g0942 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele11g0942 264 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lele11g0942 264 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 178 - -
Lele11g0942 264 FunFam Myb transcription factor 11 67 - -
Lele11g0942 264 SMART sant 13 63 IPR001005 -
Lele11g0942 264 SMART sant 66 114 IPR001005 -
Lele11g0942 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele11g0942 264 Gene3D - 14 66 - -
Lele11g0942 264 Gene3D - 69 138 - -
Lele11g0942 264 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele11g0942 264 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele11g0942 264 CDD SANT 16 61 IPR001005 -
Lele11g0942 264 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0942 Lele-ChrLele11 12386256 12387256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0942 1 239 MYB Transcription Factor Family AT4G09460 60.417 3.24e-88 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele11g0942 Myb_DNA-binding 1.2e-14 CL0123