Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0939 ATGCGACTACAGAATTCAATTAACGGATGCTTCAGTGTCCGTTGTTTAAGTCGGATAGAGCCCCAACATGATCCCCTTACTCCCTTAAGCATTGGTTTGAATAATGAAAATGAAACTAGGAAGAATAACAAAGTCAACAAATTGAAGCAATTGGGTTCCCCCGCTTTAGATTCAAAGAGCAGAGCAAAGACCATTGGTTTCAATAAAATTAAAGAAGTTGGAGCCAAAAAGAAGCAGCAGATTGAATCTTCTCCCTTTGCTGCCAAGTCCTTTTCTGAACTTGGCCTCCCTCATTTGTTGGCTGAGAGATTGGGAAATGAAGGTTTTCCGGTTCCGACTGAAGTGCAATCTGCAGCAATTCCTACAATTTTTAATAATCATGATGTCATAATTCAATCTTACACTGGATCAGGGAAAACATTGGCTTATCTTCTTCCTATACTATCTAATGTTGGCCCTTTGAGGAACAAAACTTCTGAAGGTAACAGTGATGGTGAACCTGGGAAGAAAATGGGAATAGAGGCCGTAATTGTTGCTCCCTCTAGGGAGCTAGGTATGCAGATAGTGAGGGAGTTTGAGAAGATACTCGGACTTGCTAACAAAAAGGCTGTTCAACAGCTTGTGGGAGGTGCGAACCGATCCAGGCAAGAAGAAGCTCTCAAGAAAAATAAACCCGCCATCGTTGTTGGCACACCTGGTAGAATTGCAGAGCTCAGTGCAGCTGGGAAACTTCACACCCATGGCTGTCGTTATTTGGTCCTGGATGAAGTTGATGAACTCCTATCGTTTAACTTTCGGGAGGACATGCACCGGATACTAGAACATGTGGGGATAAGATCAGGAGCTGATCCATGA 855 0.4316 MRLQNSINGCFSVRCLSRIEPQHDPLTPLSIGLNNENETRKNNKVNKLKQLGSPALDSKSRAKTIGFNKIKEVGAKKKQQIESSPFAAKSFSELGLPHLLAERLGNEGFPVPTEVQSAAIPTIFNNHDVIIQSYTGSGKTLAYLLPILSNVGPLRNKTSEGNSDGEPGKKMGIEAVIVAPSRELGMQIVREFEKILGLANKKAVQQLVGGANRSRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRYLVLDEVDELLSFNFREDMHRILEHVGIRSGADP 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0939 284 SMART ultradead3 108 281 IPR014001 -
Lele11g0939 284 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 89 117 IPR014014 GO:0003724
Lele11g0939 284 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 68 277 - -
Lele11g0939 284 CDD DEADc 100 276 - -
Lele11g0939 284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 277 IPR027417 -
Lele11g0939 284 Gene3D - 55 283 IPR027417 -
Lele11g0939 284 Pfam DEAD/DEAH box helicase 113 276 IPR011545 GO:0003676|GO:0005524
Lele11g0939 284 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 120 273 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0939 Lele-ChrLele11 11777925 11779313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0939 91 274 Eukaryotic Initiation Factors Gene Family AT5G11200 31.892 5.44e-22 93.2