Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0932 ATGGAACCGACTTCTGAAGGTAGCAGTGGAGGCGTTGGCGGTGGGCTTTCCCGGTTCCGGTCAACTCCGGCCACGTGGTTAGAAGCCCTGCTCAAGGAGGAAGACGAAGAAGACCGATTGGATACCACCCAGATGCTCGCTACAGGTACTGATAACTTGTCCAGAAATACGGCGTCTTTCGATTCGCCGGTGGCTGATGGAGGTGGTTTCGATGCTGGGTCATCGTCAGGTGGATTTTGCCGGCAGAATAGTTCTCCGGCGAACTTATTCGGGAATTCAATGGTTGCCTCTGAAACAGGGTGGTTCACCAAGTATGGGGTTCAATACAATTATGACGTTAGCCCACAAGATGTCGATGTTTCTTCCATGGATAATTTCAAACCAGTTAGACAGAATGTTGAGCATACTGGCAAAACACCAGACATAGACATGGAGAAGATTTTGGAGGATTCAGTACCTTGCAGAGTTCGGGCAAAGCGTGGACATGCTACGCATCCAAGGAGCATTGCTGAAAGGGTTCGTAGGACTCGGATAAGTGATCGCATACGGAAGCTTCAAGAACTTGTGCCAAACATGGATAAGCAAACGAATACTGCAGAAATGTTAGACGAGGCTGTAGCATATGTGAAGTCTCTGCAGAAGCAAATTGAGGAACTTACAGAGCACCAACGAAAATGTAAATGCACAGTTCAAGAGTAA 699 0.4793 MEPTSEGSSGGVGGGLSRFRSTPATWLEALLKEEDEEDRLDTTQMLATGTDNLSRNTASFDSPVADGGGFDAGSSSGGFCRQNSSPANLFGNSMVASETGWFTKYGVQYNYDVSPQDVDVSSMDNFKPVRQNVEHTGKTPDIDMEKILEDSVPCRVRAKRGHATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKSLQKQIEELTEHQRKCKCTVQE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0932 232 FunFam Transcription factor bHLH130 family 163 231 - -
Lele11g0932 232 Gene3D - 159 232 IPR036638 GO:0046983
Lele11g0932 232 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 212 IPR011598 GO:0046983
Lele11g0932 232 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 69 226 - -
Lele11g0932 232 SMART finulus 168 218 IPR011598 GO:0046983
Lele11g0932 232 Pfam Helix-loop-helix DNA-binding domain 167 213 IPR011598 GO:0046983
Lele11g0932 232 Coils Coil 202 232 - -
Lele11g0932 232 MobiDBLite consensus disorder prediction 1 20 - -
Lele11g0932 232 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 228 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0932 Lele-ChrLele11 11203969 11209164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0932 18 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 48.739 1.12e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele11g0932 HLH 9.8e-10 No_clan