Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0927 ATGGGATGCAAGGACGACCATGGAGAGGGTAGAGGTGAAGACTTTTATAGAAAAGACAAAAAAATGATAGAGCTGGCACAAACATTGATATTGATGATGGGGAGAACATCAGAGAGTGAAGAAAGTAGTGGTTTGAAGAAGGGGCCATGGACAGCAGAAGAAGATAGAATACTTGTGGATTACATTGGGAAACATGGACATGGAAGCTGGAGCGCACTTCCAAACCTTGCAGGATTGAACAGATCTGGAAAAAGTTGCAGGCTGAGGTGGTCCACCATAGCAGCGACATCGTCTTCGAGTTTGCTTCCCAATCTGGTTTCACCCACACCTGATTTCTCTTTATCATCACCATCTTTTAACAAAATGAAAGACAAGGTAAACCAGAATGATGGCACTAATATTAATCCACCTCCTTCCACTTCAGCATTAACCTTTGATACTTTAGGAGATTTTATGGGTGACCTAGCAAGTGAAGCTTACTGGAAAGATCTTATAGAGCAAGAATCTAACCAGCCATGGTCAATCTCATAA 531 0.42 MGCKDDHGEGRGEDFYRKDKKMIELAQTLILMMGRTSESEESSGLKKGPWTAEEDRILVDYIGKHGHGSWSALPNLAGLNRSGKSCRLRWSTIAATSSSSLLPNLVSPTPDFSLSSPSFNKMKDKVNQNDGTNINPPPSTSALTFDTLGDFMGDLASEAYWKDLIEQESNQPWSIS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0927 176 CDD SANT 49 90 IPR001005 -
Lele11g0927 176 FunFam MYB-related transcription factor 46 94 - -
Lele11g0927 176 Pfam Myb-like DNA-binding domain 47 91 IPR001005 -
Lele11g0927 176 SUPERFAMILY Homeodomain-like 44 95 IPR009057 -
Lele11g0927 176 ProSiteProfiles Myb-like domain profile. 42 94 IPR001005 -
Lele11g0927 176 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 33 91 - -
Lele11g0927 176 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 98 IPR017930 -
Lele11g0927 176 Gene3D - 44 97 - -
Lele11g0927 176 SMART sant 46 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0927 Lele-ChrLele11 10823380 10828821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0927 33 91 MYB Transcription Factor Family AT1G34670 71.186 2.13e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele11g0927 Myb_DNA-binding 9.4e-14 CL0123