Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0910 ATGGCACAACTCATCAAACTCACATTCGTAGTGATTCTTCTCTTGTCTTTCTTCTCGATTGATGCTTTAGCTAACCAATCCTCGAACCGAGCTCGTTGTCGTCGATATAATCCTCGAACCGTCGCTTACATAAAAGCCTCTTGCCAAACCACTTTGTACCCAAATCTATGTCTTCACTGCTTATATAAATTTGCCAATTCAAATATTCAAAGTCCCCAACAATTAACTCATGTGGCTTTATCTGTGAGTCTACAACGAGCACTATACACAAGAGATTACTTGCTGCAAGTGGCCAAACAATTCAAGGCACTCAACAATGGTAATAATAATGGTAGGGATTATCTAGTTCTGCAAGATTGCTTGAAGCAGATCAATGATAGCGCAGATCAGCTTGGCCTTTCGATAAAAGAGCTCGCGCGGTTGAATAAGATCCCAAACACTTTGATCAACGATGCTGTGTTGTGGCACATAAGCAACGTTGAGACGTGGGTGAGCACTGCCCTTACCGATGCGAGCACTTGTGTGGATTACTTCCCAGGTCGTAGGATGAGTAAGATGAAGGCTACAGTAAGGGGTAAAGTATTGAATGTTGCGCAAGTCACTAGCAATGCACTTGCCTTATTTCAGAAATATGCAACTAAGTACCGAGAAGCAGCACAAGCCAACAGGAGACCTTGA 678 0.4292 MAQLIKLTFVVILLLSFFSIDALANQSSNRARCRRYNPRTVAYIKASCQTTLYPNLCLHCLYKFANSNIQSPQQLTHVALSVSLQRALYTRDYLLQVAKQFKALNNGNNNGRDYLVLQDCLKQINDSADQLGLSIKELARLNKIPNTLINDAVLWHISNVETWVSTALTDASTCVDYFPGRRMSKMKATVRGKVLNVAQVTSNALALFQKYATKYREAAQANRRP 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0910 225 Pfam Plant invertase/pectin methylesterase inhibitor 43 207 IPR006501 GO:0004857
Lele11g0910 225 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 210 IPR035513 -
Lele11g0910 225 CDD PMEI-like_3 46 213 - -
Lele11g0910 225 SMART PMEI_2 39 207 IPR006501 GO:0004857
Lele11g0910 225 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 211 IPR035513 -
Lele11g0910 225 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 211 IPR006501 GO:0004857
Lele11g0910 225 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 207 - -
Lele11g0910 225 FunFam Pectinesterase inhibitor 3 39 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0910 Lele-ChrLele11 9757635 9758312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0910 19 209 Carbohydrate Esterase AT3G14310 24.870 1.95e-13 67.0