Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0896 ATGGGAAGAGCACCATGCTGCGACAAAAATGGAATCAAGAAGGGTCCATGGACGCCCGAGGAAGATCTAAAGCTTATCAACTACATCCAGACTCATGGACCTGGCAATTGGCGAACCCTCCCCAAGAATGCTGGTCTTCAAAGATGCGGCAAAAGTTGCCGGCTTCGATGGACAAATTACCTGAGACCTGATATCAAGAGAGGGAGATTCTCCTTTGAGGAAGAAGAGACCATCATTCAGTTGCACAGTATTATGGGAAACAAATGGTCGGCTATAGCAGCAAGATTACCAGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACTCACATCAGGAAGAGACTGCTTCGAAATGGAATTGATCCTGTTACTCATGCCCCACGACTCGACCTTCTCGAGATATCATCCATTCTAAGATCAGTGCTTACCAACCAATCGCTTCTGAATCTGCAAAGTTTATTGGGAGCTCAAGCTTTGATGAACCCAGAATTCTTGAAGCTGGCCACCACTCTGTTAGCTCTCAAGAACAATGAGAACCCAGATTTGGTTTCACAGAATCTACAACAAATTCTGATGCAGGCCGGGAATCATCAAGGAGACAACCAAACCTCCCCATTGATCAGCCAGATGCCAACTCCGAGTACCAATATGCATGAAGCTCTCTCAGGCGATATCACGAACATGTGCTGTGCAAGTTTGCAACAGAATTCAGCACTTCCTTCATATTTGTGTGATGAGAATCTTATTAATCTGCAACAAAACCAAGTTGATTTGCAAGGAAGAAACCCAACAACATTCGAGCAGAATCTAATGAACAATGAAAATGTCCAAAACATGGGATATGATTCAGTTCTGTCAACGCCTTTGTCGAGCCCAGCCCCATTGAATTCATCGTCTTCGTATGTGAATAGCAGCGCGGAGGAGCAAAGGGATAGCCATTGCAGCGACTTATTCAAGTTCGAAATTCCAGAGAGTATCGACATCAGTGATTTCTTGTAA 1002 0.4421 MGRAPCCDKNGIKKGPWTPEEDLKLINYIQTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRNGIDPVTHAPRLDLLEISSILRSVLTNQSLLNLQSLLGAQALMNPEFLKLATTLLALKNNENPDLVSQNLQQILMQAGNHQGDNQTSPLISQMPTPSTNMHEALSGDITNMCCASLQQNSALPSYLCDENLINLQQNQVDLQGRNPTTFEQNLMNNENVQNMGYDSVLSTPLSSPAPLNSSSSYVNSSAEEQRDSHCSDLFKFEIPESIDISDFL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0896 333 Gene3D - 13 66 - -
Lele11g0896 333 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele11g0896 333 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele11g0896 333 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele11g0896 333 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele11g0896 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele11g0896 333 Gene3D - 69 116 - -
Lele11g0896 333 SMART sant 66 114 IPR001005 -
Lele11g0896 333 SMART sant 13 63 IPR001005 -
Lele11g0896 333 FunFam MYB-related transcription factor 13 66 - -
Lele11g0896 333 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 269 - -
Lele11g0896 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele11g0896 333 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele11g0896 333 FunFam Transcription factor MYB39 69 130 - -
Lele11g0896 333 MobiDBLite consensus disorder prediction 282 309 - -
Lele11g0896 333 CDD SANT 16 61 IPR001005 -
Lele11g0896 333 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0896 Lele-ChrLele11 9146677 9148009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0896 1 333 MYB Transcription Factor Family AT4G21440 49.454 3.41e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele11g0896 Myb_DNA-binding 2.2e-15 CL0123