Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0873 ATGTCGACTGCGAGTAACAGTGGCAAATCCACCAAGGGTGGCGGTGGAGAAAACCGAGATTGGGAGATTGAAAGAGGTAAAGACATAGATTTGAGCGGTGAGAGGCGGCAATGGAAGCCAGTTTTTGAAGATGCTTCCATGTCGAACAGACCTCTGAAGAAAATCCGAAGCCCACAACGTGAAAACTCAAACCAAACTCGATCCTCTGTTCCCATTCTACCACATCATCCTTCTTCGTCTTCTTCCAGAATCGTCTTCCCTTTCGCCTTCGATGGTTCTCAACAGCCTCTGCAATTTCCCCATCACCAATTAGGTTCGCCTGCGTTTCGCCCACCGTTTACGCAAAATCTGCAGCAGATGATTTCTTTTGACTCCCTACAACAACAACCGAACATGGGGTACCCTCAATTCTTTGCCCAAGACTCTGCAATCGCACACCAGCAACATCATCATCATCAGCATCAACAACAGCAGCAACTTCTTCGGTATTGCAGAGACTCATTGAATCTGAGTCCAAGAGGAAGGATGATGATGATGATGAGCAGTGTTGGGCCTGACGGGAGGCCAATGTATCGGCCACCTCCTCAGCCTATAAACACTACGAAGCTTTACAGAGGAGTGAGGCAGCGTCATTGGGGAAAATGGGTGGCGGAGATTCGTCTTCCTCGAAACAGAACTCGCCTCTGGCTGGGAACATTCGACACAGCAGAAGATGCTGCCTTGGCTTATGATCGAGAGGCCTTTAAGCTCAGAGGAGAGAATGCTCGGCTCAATTTCCCAGAGCTCTTCCTTAATAAGGATAAGCCATCGGCAACAGCAGCTCCAGATTCATCTGCTTCTTCTCCGGCGAAGCAAACTGACTCTGTTCCAGAAGATTTTACTCCGGAAGCTCCGATTGCAGAGGAGAAGCCTCCGCAACCGCCTCCACCGGAAGAGAGCACCGACTATGATTCTGGAATTGGTTCGAGTGATGCTACAATGAGCGACGAAGTTCAGGCTGCGGCTAATACTGGAACAAGGGAGGGCACTTCGTCGGCAGCGTCGCAAGAACTGGTTTGGGGAGAAATGGCGGCTTGGTTCAATGCAATTCCGGCTGGTTGGGGTCCGGGTAGCCCGGTGTGGGATGATTTGGACACGTTTCAGTCACAACTTCCATTTTTCAATCCCAATCACCAAGAATTCAATGATGCAGGTCATCACAGACAGCAAGAAAATAATACAGGTCCATCAGATTCTTCCACTTCTTCCTCTTCTTGTCCTGTAAGACCCTTCTTCTGGAAAGGTCATGATTGA 1293 0.4934 MSTASNSGKSTKGGGGENRDWEIERGKDIDLSGERRQWKPVFEDASMSNRPLKKIRSPQRENSNQTRSSVPILPHHPSSSSSRIVFPFAFDGSQQPLQFPHHQLGSPAFRPPFTQNLQQMISFDSLQQQPNMGYPQFFAQDSAIAHQQHHHHQHQQQQQLLRYCRDSLNLSPRGRMMMMMSSVGPDGRPMYRPPPQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKPSATAAPDSSASSPAKQTDSVPEDFTPEAPIAEEKPPQPPPPEESTDYDSGIGSSDATMSDEVQAAANTGTREGTSSAASQELVWGEMAAWFNAIPAGWGPGSPVWDDLDTFQSQLPFFNPNHQEFNDAGHHRQQENNTGPSDSSTSSSSCPVRPFFWKGHD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0873 430 MobiDBLite consensus disorder prediction 58 78 - -
Lele11g0873 430 CDD AP2 202 262 IPR001471 GO:0003700|GO:0006355
Lele11g0873 430 Gene3D AP2/ERF domain 203 261 IPR036955 GO:0003700|GO:0006355
Lele11g0873 430 SMART rav1_2 203 266 IPR001471 GO:0003700|GO:0006355
Lele11g0873 430 FunFam Ethylene-responsive transcription factor 2 202 261 - -
Lele11g0873 430 MobiDBLite consensus disorder prediction 401 421 - -
Lele11g0873 430 SUPERFAMILY DNA-binding domain 203 261 IPR016177 GO:0003677
Lele11g0873 430 Pfam AP2 domain 204 252 IPR001471 GO:0003700|GO:0006355
Lele11g0873 430 PRINTS Ethylene responsive element binding protein signature 204 215 IPR001471 GO:0003700|GO:0006355
Lele11g0873 430 PRINTS Ethylene responsive element binding protein signature 226 242 IPR001471 GO:0003700|GO:0006355
Lele11g0873 430 MobiDBLite consensus disorder prediction 268 324 - -
Lele11g0873 430 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 8 377 - -
Lele11g0873 430 MobiDBLite consensus disorder prediction 1 78 - -
Lele11g0873 430 MobiDBLite consensus disorder prediction 386 430 - -
Lele11g0873 430 ProSiteProfiles AP2/ERF domain profile. 203 260 IPR001471 GO:0003700|GO:0006355
Lele11g0873 430 MobiDBLite consensus disorder prediction 15 41 - -
Lele11g0873 430 MobiDBLite consensus disorder prediction 271 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0873 Lele-ChrLele11 8754213 8755505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0873 1 376 AP2-EREBP Transcription Factor Family AT2G20880 40.779 2.69e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele11g0873 AP2 3.1e-13 CL0081