Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0869 ATGGCTATTGCCAGCGAACATGGTCAACTCAGGGACCGAGGTCAAATCCCAGTCATTTACCGACGAACACCATGTAAATATCGAGGCAAAAACATTGCCTTCCAGGTGAATGAAGGTTCTACGCCCTTTTGGCTTTCCCTTTTGGTGGAATTTGAGGATGGAGAAGGAGATATAGGCTCTATGCATATTCAAGAAGCAGGGTCTATAGAGTGGCTAGAGATGAATCATCTGTGGGGTGCAAATTGGTGCATTATTGGTGGGCCATTGAGGGGACCTTTTTCTGTGAAACTGAGCACATCCACTGGGAGATCTCTGTCTGCCAGAGATGTTATTCCAAGTAGTTGGTCTGCAAAAGCTACTTACACATCTCGTCTCAATTTCTACCCTTAG 390 0.4564 MAIASEHGQLRDRGQIPVIYRRTPCKYRGKNIAFQVNEGSTPFWLSLLVEFEDGEGDIGSMHIQEAGSIEWLEMNHLWGANWCIIGGPLRGPFSVKLSTSTGRSLSARDVIPSSWSAKATYTSRLNFYP 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0869 129 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 43 123 IPR007117 -
Lele11g0869 129 Pfam Expansin C-terminal domain 32 112 IPR007117 -
Lele11g0869 129 FunFam Beta-expansin 3 27 128 - -
Lele11g0869 129 PANTHER EXPANSIN-B3 1 127 - -
Lele11g0869 129 PRINTS Expansin/Lol pI family signature 13 29 IPR007118 GO:0005576
Lele11g0869 129 PRINTS Expansin/Lol pI family signature 71 85 IPR007118 GO:0005576
Lele11g0869 129 PRINTS Expansin/Lol pI family signature 109 123 IPR007118 GO:0005576
Lele11g0869 129 Gene3D - 24 124 IPR036749 -
Lele11g0869 129 SUPERFAMILY PHL pollen allergen 30 123 IPR036749 -
Lele11g0869 129 PRINTS Major pollen allergen Lol pI signature 2 17 IPR005795 GO:0005576|GO:0019953
Lele11g0869 129 PRINTS Major pollen allergen Lol pI signature 34 49 IPR005795 GO:0005576|GO:0019953
Lele11g0869 129 PRINTS Major pollen allergen Lol pI signature 50 65 IPR005795 GO:0005576|GO:0019953
Lele11g0869 129 PRINTS Major pollen allergen Lol pI signature 99 116 IPR005795 GO:0005576|GO:0019953
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0869 Lele-ChrLele11 8724118 8725675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0869 1 127 Expansin Gene Family AT1G65680 37.692 1.71e-29 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0869 11 8724118 8725675 Lele11g0869 11 8724118 8725675 ECH
Lele09g0859 09 6891473 6893160 Lele11g0869 11 8724118 8725675 hybridization
Lele10g0792 10 6278566 6280741 Lele11g0869 11 8724118 8725675 hybridization