Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0862 ATGGAGCCTTTGCTGAAAGGCGAAAGCAGTGTTCAGAGGATGCCGTCGCCGGCATTATTCCATCGTCGCTCACATGCTATCGTTTACGGCTCGCCCTCCGCTAAAGCTGCTGCACTTGTGGATCTGGCTGAAGATGGCGTCGGCATCCCAGAGCAAATACTCGATTCGTCGGAATTTCAGAGTTCCGCTACATTTTACTTTATATTTACTAAATTAAACTTTCTATGGTCACTTGGTTACTTTGCTCTGCTAGTCCTGAATTTCCTTGAGAAACCCTTGTGGTGTGAAAAGTATACCGCTTATTCTTGCGACGATAGAGTGTATTTCTTCCTGGGACAGCTGCCATATTTAACTGGTGCAGAATGTGTTATGTACGAGGGTATAACTCTTGTTGTGCTTATTGTGCATACCTTTTTCCCGATATCCTATGAAGGCTCCCGTATATATTGGAAAAAAGTTGTTAATCACTTGAAGGTATTGTGTCTGTTGGTTCTGGTTGCTGATATGGTGGTTTATGCTCTGTATTTGTCTCCAGTGACTGTTTATTCTCTACCTGTCAGATTTGCACCTTATATCAGGGTTGTTCTTTTCATTTTACATATTAGGGAATTACGAGCAACCATTACCATCTTGGCTGGAATGCTTGGTACCTACCTGAATGTCCTGGCTTTGGGGCTTCTCTTTCTTCTTTTCTCAAGTTGGGTGGCCTATGTGATGTTTGAAGATACACAACAGGGGAAAATAGTATTCACTTCCTATGGCACCACGTTATATCAGATGTTTGTTTTATTTACCACGTCCAATAATCCAGATGTTTGGATCCCTGCATACAAGGCTTCACGTTGGTATTGCCTGTTTTTTGTTCTCTTTGTGCTGTTGGGGGTTTACTTTGTCACAAACTTGGTCCTTGCCGTTGTTTATGATAGTTTCAAGAGTGAGCTTGTAAAACAAGTTTCTGAGATGGACCGAATGAGAAGAAATATGTTGGGGAAAGCATTTGATCTATTAGATAATGATCATGTTGGGTATCTAAACAAAGGCCAATGCATTGAACTCTTTCATGAGCTGAACAAGTACAGGACTTTGCCAAAGATTTCCCAGGAAGAATTTGAGTTGATATTTGATGAGCTGGACGATACTCGTGATGTAAAGATCAACAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTCAAGTTCCAAAAGGAGGATAGTCTATCTTACTTTGAGTATTTACCATTCTACCATGCTCCTATCTCCAAGGAGTTGAAAGCATTTGTCCGGAGCCCCAAGTTTGGATACCTAATATCCTTCATTCTAATATTGAATCTGATTGCTGTTATAATTGAGACAACGCTTGATATACAAAATAATTCTGCTCAAAAGGTTTGGCAAGTGGTTGAATTTGTTTTTGGGTGGATATATGTAATAGAAATGGCTTTAAAAGTTTATGCATATGGATTCGAGAATTATTGGCGGGATGGTCAGAATCGTTTTGACTTTGTGATCACATGGGTAATTGTCATTGGAGAAACTATAACTTTTGTTACACCCGATGGACTGGATTTTTTCTCAAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGAGGTTGATAAGGCTCTTAATGCATGTCCCGCAATACCGAGCCTTTGTGGCAACCTTCCTAACTCTCATACCAAGTTTGATGCCATACCTTGGAACCATATTTTGTGTCTTATGTATATATTGCTCCCTTGGTGTACAGATCTTCGGTGGAATTGTCAATGCTGGAAATCCCAAATTGGAACCAACAGGTCTTGCTGACAATGATTATCTGATCTTTAATTTCAATGATTATCCAAATGGAATGGTTACACTTTTCAATTTGCTGGTCATGGGAAACTGGCAAATATGGATGCAGAGCTACAAGGAACTAACAGGGACTTCTTGGACCTATATTTACTTCATTAGCTTCTACTTAATAACTGTTCTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGACGTCTGATGATACTAGCGAAGATGATGACAAGGAAGCTGAAGGAGAGAAACATCGAAGACGACGTATTGGCACCAAAACACGTAGCCAAAGGGTTGATGCTCTTCTTCATCATATGTTGAGCTCTGAGTTATGTCAAGCATAG 2193 0.4013 MEPLLKGESSVQRMPSPALFHRRSHAIVYGSPSAKAAALVDLAEDGVGIPEQILDSSEFQSSATFYFIFTKLNFLWSLGYFALLVLNFLEKPLWCEKYTAYSCDDRVYFFLGQLPYLTGAECVMYEGITLVVLIVHTFFPISYEGSRIYWKKVVNHLKVLCLLVLVADMVVYALYLSPVTVYSLPVRFAPYIRVVLFILHIRELRATITILAGMLGTYLNVLALGLLFLLFSSWVAYVMFEDTQQGKIVFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLFVLLGVYFVTNLVLAVVYDSFKSELVKQVSEMDRMRRNMLGKAFDLLDNDHVGYLNKGQCIELFHELNKYRTLPKISQEEFELIFDELDDTRDVKINKDEFADICNAIAFKFQKEDSLSYFEYLPFYHAPISKELKAFVRSPKFGYLISFILILNLIAVIIETTLDIQNNSAQKVWQVVEFVFGWIYVIEMALKVYAYGFENYWRDGQNRFDFVITWVIVIGETITFVTPDGLDFFSNGEWIRYLLLARMLRLIRLLMHVPQYRAFVATFLTLIPSLMPYLGTIFCVLCIYCSLGVQIFGGIVNAGNPKLEPTGLADNDYLIFNFNDYPNGMVTLFNLLVMGNWQIWMQSYKELTGTSWTYIYFISFYLITVLLLLNLVVAFVLEAFFAEMELETSDDTSEDDDKEAEGEKHRRRRIGTKTRSQRVDALLHHMLSSELCQA 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0862 730 Pfam Ion transport protein 131 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele11g0862 730 Pfam Ion transport protein 433 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele11g0862 730 SUPERFAMILY EF-hand 307 397 IPR011992 -
Lele11g0862 730 Gene3D - 423 554 IPR027359 -
Lele11g0862 730 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Lele11g0862 730 SUPERFAMILY Voltage-gated potassium channels 430 676 - -
Lele11g0862 730 FunFam Two pore calcium channel protein 1 556 714 - -
Lele11g0862 730 FunFam Two pore calcium channel protein 1 423 555 - -
Lele11g0862 730 FunFam Two pore calcium channel protein 1 203 314 - -
Lele11g0862 730 Pfam EF-hand domain pair 329 393 IPR002048 GO:0005509
Lele11g0862 730 Gene3D - 209 332 - -
Lele11g0862 730 Gene3D - 555 717 - -
Lele11g0862 730 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 3 729 IPR044581 GO:0005245
Lele11g0862 730 Gene3D - 333 395 - -
Lele11g0862 730 SMART efh_1 328 356 IPR002048 GO:0005509
Lele11g0862 730 SMART efh_1 369 397 IPR002048 GO:0005509
Lele11g0862 730 MobiDBLite consensus disorder prediction 687 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0862 Lele-ChrLele11 8637105 8647522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0862 22 729 Ion Channels AT4G03560 70.381 0.0 1055