Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0815 ATGAAGGAGGTCTTCTACAGCCAAAGGGCAAAAGCAGAGGGAAAAAAGAAAAATAATAGGAATCTGGATTTCAGTGGGAATCATCAGCAATCACTAGGGCTTATACATCCAAAAAGAGCACAAGAATCACAAGAAGAACAAAACTTGAGCATATTCAGTCATTTTCAGTTTCCTCACCAACTTGCCCACAACCAAAACCCACATGTAGAAAGCATATTTTCCCACCATACACAACCACACCAGGAAGAAGAAGAAGAAGAAGAACCAGAAAGTTCCAAGAACACAAAACAAAAGAGACGGATGGGCATGAAGAGCACAGGAGGAGAGATAGTTCAGGTTCAAGGAGGCCACATTGTTCGATCCACTGGTAGAAAAGATCGTCACAGTAAGGTTTACACTTCAAAAGGCCCTCGTGACCGTAGGGTTCGACTCTCAGCTCATACAGCCATTCAATTCTACGATGTTCAAGACCGTCTCGGCTATGACCGGCCCAGTAAGGCCGTGGATTGGCTCATCACGAAGGCGAAATCCGCCATTGACAATCTCGCAGAGCTTCCTCCATGGAATCCAGCAACTACTAATACTGAAGAAGCTCCTGAAATAGGAATTGCAGAGGAAACAGAGTCTTCTGGTTACAACATTCAGCTTCAGAGGCAGTTTGGGGAGAACCCAGATAACCATTCTGGTTTTATTTCGTCGCAGATGGGAACTGATGCCATAGCTTTCTTCCCCACCACTACAGCTAGTATGAGTTCCTCTATCAATTTTCAGAACTACCCAGGTGATATAATCTCCAGAATTACCAACCCCAATGAAGATCTTGGACTTTCTCTTCATTCGTTTCAAGACCCAGGTTTGATTCATGGCCAATCATCACAAGGAAACGCGAATCCTGCAGGATTTGTGACTTGGACCAACAATGACGCTTCTATGTTGGTGGGGCAAGGTTCGGCATTTTCTCAAAGGGGGACCCTTCAGTCCAGTTTTTCAGCATGGAATGACATTGCAATGACTTGTTCTTCTTCAGAGCAACAGAACAAGTCCCAGGCTTCGATTTTTGGAAGCAGGTTTCTGTCTGATGGAATGGGAATTCCTGGATTCTGTATTCCCGCAAGAATTCAAGGTGAGGAGGACGATGGAATGGGTTCTGATCATAGGCCATCTTCTTCTGCTTCTCCTAATTCTCATCACTGA 1194 0.4472 MKEVFYSQRAKAEGKKKNNRNLDFSGNHQQSLGLIHPKRAQESQEEQNLSIFSHFQFPHQLAHNQNPHVESIFSHHTQPHQEEEEEEEPESSKNTKQKRRMGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLITKAKSAIDNLAELPPWNPATTNTEEAPEIGIAEETESSGYNIQLQRQFGENPDNHSGFISSQMGTDAIAFFPTTTASMSSSINFQNYPGDIISRITNPNEDLGLSLHSFQDPGLIHGQSSQGNANPAGFVTWTNNDASMLVGQGSAFSQRGTLQSSFSAWNDIAMTCSSSEQQNKSQASIFGSRFLSDGMGIPGFCIPARIQGEEDDGMGSDHRPSSSASPNSHH 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0815 397 MobiDBLite consensus disorder prediction 121 140 - -
Lele11g0815 397 MobiDBLite consensus disorder prediction 1 46 - -
Lele11g0815 397 ProSiteProfiles TCP domain profile. 124 182 IPR017887 -
Lele11g0815 397 MobiDBLite consensus disorder prediction 74 104 - -
Lele11g0815 397 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 76 354 IPR005333 GO:0003700
Lele11g0815 397 MobiDBLite consensus disorder prediction 1 22 - -
Lele11g0815 397 MobiDBLite consensus disorder prediction 373 397 - -
Lele11g0815 397 Pfam TCP family transcription factor 123 212 IPR017887 -
Lele11g0815 397 MobiDBLite consensus disorder prediction 23 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0815 Lele-ChrLele11 8284035 8285846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0815 108 396 TCP Transcription Factor Family AT1G53230 41.304 2.68e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele11g0815 TCP 3.4e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0815 11 8284035 8285846 Lele11g0815 11 8284035 8285846 ECH
Lele09g0812 09 6470313 6471203 Lele11g0815 11 8284035 8285846 hybridization
Lele10g0740 10 5710735 5711628 Lele11g0815 11 8284035 8285846 hybridization