Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0799 ATGGACTCCCCCACGGGAGCTCCGTCGCCCCCCTCCACCGCTCCGCCCCGGTCGTCGCCGTTTCCCGGACGAGAAGACTGCTGGAGTGAGGACGCCACCTTCACTCTCATCGATGCTTGGGGTGAACGTCACCTTGAGCTTAATCGAGGAAACCTCCGTCAGAAGCACTGGCAAGAGGTCGCCGACGCCGTTAACGCCAATCATGGCCACGTCAAGAAGGCGCGCCGAACCGACGTCCAGTGCAAGAACCGCATAGACACTCTGAAGAAGAAGTACAAGATCGAGAAGAACAAGGTCATCGATTTCGACGGGAACTACACTAGCCCTTGGCCCTTCTTCACCCGCCTTGACGCTCTCATCGGCGATGCGTTTCCAGTTAAGAGACTTCCGCCGGCGATCGACAGTAGCCTTCGTAGCTCCCCTCCCTCGAAGTCTCCGGCATGGGTGATCTCACAGGTACCTGTCGCCCCCCGATCCGGCACTCAGAAACGGCCGTCGTTGCCGGCGCCGGTGCCGGCAGGCATGAAAGACTCGTCTTTCCGTCGGAACTTCTCTGCTTTTGCAGCGGCAGCTGCAGCCGCGGCCGAGGCAGGGGATGCAAATAGTGACGATTCAGATGAGTCAAGGTCAAGTAGTGCCACCGGAAGTAGAAAGAGAGGAAGAGAAAGAGAGAGAAAGAGGGAAAACGATAGGGATTCCGAATTTGGGTACAGAGAACTGGCACAAGCAATAGAGAGGTTCGGGGAGATATACGAGAGAGTAGAGGCGGCGAAGCAAAGGCAAATGGTGGAGTTAGAGAAACAGAGGATGCAATTTGCTAAGGATTTGGAGTACCAGAGGATGGAGCTTTTCATGGAAACGCAGGTTCAGCTTCAAAAAATCAAGCGCGCCAAGCGATCTTCCCAGGCTGGTGAGTCTTATAAACCTTTATGTTTATCGTTAGAGCCATTACTGCAAATGCTACAGTGCACATTTTTGCTTAATTTTTCTGATTTTATAGCACTATTATCAGTTTAG 1017 0.5349 MDSPTGAPSPPSTAPPRSSPFPGREDCWSEDATFTLIDAWGERHLELNRGNLRQKHWQEVADAVNANHGHVKKARRTDVQCKNRIDTLKKKYKIEKNKVIDFDGNYTSPWPFFTRLDALIGDAFPVKRLPPAIDSSLRSSPPSKSPAWVISQVPVAPRSGTQKRPSLPAPVPAGMKDSSFRRNFSAFAAAAAAAAEAGDANSDDSDESRSSSATGSRKRGRERERKRENDRDSEFGYRELAQAIERFGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMELFMETQVQLQKIKRAKRSSQAGESYKPLCLSLEPLLQMLQCTFLLNFSDFIALLSV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0799 338 Gene3D - 28 94 - -
Lele11g0799 338 Pfam Myb/SANT-like DNA-binding domain 25 119 IPR044822 -
Lele11g0799 338 Coils Coil 251 271 - -
Lele11g0799 338 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 8 299 IPR044823 -
Lele11g0799 338 MobiDBLite consensus disorder prediction 1 18 - -
Lele11g0799 338 MobiDBLite consensus disorder prediction 196 232 - -
Lele11g0799 338 FunFam trihelix transcription factor ASIL2 28 94 - -
Lele11g0799 338 MobiDBLite consensus disorder prediction 1 25 - -
Lele11g0799 338 MobiDBLite consensus disorder prediction 154 174 - -
Lele11g0799 338 MobiDBLite consensus disorder prediction 202 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0799 Lele-ChrLele11 8079969 8080985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0799 4 296 Trihelix Transcription Factor Family AT3G14180 35.754 9.71e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele11g0799 Myb_DNA-bind_4 1.6e-24 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0799 11 8079969 8080985 Lele11g0799 11 8079969 8080985 ECH
Lele09g0794 09 6280855 6284894 Lele11g0799 11 8079969 8080985 hybridization
Lele10g0722 10 5519419 5520611 Lele11g0799 11 8079969 8080985 hybridization