Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0798 ATGGCGGAGACACAAGAAGATTCAGGGCCTACAGAGCAAGGGCCCTCTAATGCTTCATGGTGGCCTTCAGATTTCGTTGAAAAATTTGGATCTGTTTCTCTGGGATCTCAAGATGAGGCCCTAAACAATAAAGAATCACCTAGACATTCGGAACAAGGTGATTTGTCACCTCATAGAGCATCTCAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGGTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGGAATTTTTTCATAATATTCCTACTTTGGAAGAACTTCTTGCTTTGGGAGGAGAGGGTTTTAGGGCTGATATCATTCTAGTGGATTCAGAAAAAGATAAAAGGCTATCCATGTTGAAGCAGCTGGCACTAGCACTAGTAAAAGGATTGAACTCAAATCCAGCTGCAGTTATCAAGAAAATAGCAGGATTAGTTTCTGACTTTTACAAGCGGCAAAATGTTGAAAGTCCAGCAAAAGCTGGACTGGAAGAAACCTCCCACATGTTTGAGAATCGAAGTGTCCAGTTGCTGGGGCAGATAAAGAATGGTTCATGCCGTCCTCGAGCAATCTTATTTAAAGTTTTATCAGATACTGTAGGACTTGAAAGTAAACTAATGGTGGGTTTGCCAAACGATGGGGTCCCTGATTGTGCAGATTCATACAAGCATTTGTCTGTGTTAGTTGTATTAAATTCTGTGGAGCTATTGGTTGATCTCATGCGATTCCCTGGCCAACTATATCCACAATCAACCAAGGCAATTTTTATGACGCATATTTCTGCAGCAGGAGAGAGTGATTCTGCGGAGAATGATTCCTGTGATTCGCCATTGGAACCCAACAGTCCTTTATATGGGGTTTCAGAGAGAGTAGATATTGACAGTGCTGAAAGAGAGGAAAATCTCCTATTTCACAGAAGACATGAAGCATCTTCAAATTTATCGGGCATTTCTTTACGAAATTCTATGTTACGTTCAAATGTCATTCTGGACAATAAATTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAGGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGGGCGCGGTCCATGCTTAGCGGTGATAGGAAAACATTTAGAGATTTTGCTGATGACGGGGCTACATCAAGCTATAGGTCAGATGGTGCTCCCTCATCAGAAGCTCGTAGGATCAGAAGAAGAAGCATCAGCATTACACCAGAAATTGGTGACGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAGAATCGTCTTTTGAGGGAGCAGAGGGATGATTCATCCTTCTCACATTCTCCAACTGATAGAAGTAGCGGTGGTAATCTTCAGAAAAATGTTTCAAATTTCCATCTTGGTCATGATGAAAGATCTTTATATTCTCTTAATCATGACCAAGAAACTTCTCAAAAGGCAATGTCATTACCCTCTTCACCACATGAATATAGGGGTGAAGCATCTGGGAGAAGTGGACCTTCAGGATATGGAGTAAGTAATGAGCTCCAAGCAACATGGAACAAAGTCCTCGAGTCTCCAATGTTCAATAATAAACCTCTGTTACCATATGAAGAATGGAATATTGACTTCTCAGAACTAACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTATTCCGAGGCATATGGAATGGAACAGATGTTGCCATAAAGGTTTTTCTGGAGCAAGATTTAACTACCGAAAACATGGAAGATTTCTGCAATGAGATAACAATTCTCAGCCGGCTTCGACATCCTAATGTTATTTTATTTCTTGGTGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACTGAGTATATGGAGATGGGATCTTTGTATTACTTGATCCATTCGAGTGGTCAAAAGAAGAAGCTTAGTTGGCGGAGAAGACTGAAGATGCTACGGGATATATGCAAGGGGTTGATGTGCATACATCGTATGAAGATAGTTCACCGTGACCTGAAAAGTGCCAATTGTCTTGTGAATAAGCATTGGACTGTGAAGATTTGTGATTTTGGGCTTTCAAGAATAATGACAGATTCTCCCATTAAAGATTCTTCATCGGCAGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGAAGCGAACCATTCACTGAAAAATGTGACATCTTTAGCCTAGGGGTGATAATGTGGGAGCTTTGCACTTTAAATAGGCCCTGGGAAGGTGTAGCGCCGGAGAGGGTAATTTATGCCGTTGCTAACGAGGGATCCAGACTAGAGATTCCTGAGGGTCCACTGGGCAGGCTGATTACAGATTGTTGGGCAGAACCTCATGAACGGCCAAGTTGTGAAGACATCCTTTCTCGTTTGCTTGACTGCGAATACTCATTGTGCTAA 2451 0.4227 MAETQEDSGPTEQGPSNASWWPSDFVEKFGSVSLGSQDEALNNKESPRHSEQGDLSPHRASQILWRTGMLSEPIPNGFYSVIPEKRLKEFFHNIPTLEELLALGGEGFRADIILVDSEKDKRLSMLKQLALALVKGLNSNPAAVIKKIAGLVSDFYKRQNVESPAKAGLEETSHMFENRSVQLLGQIKNGSCRPRAILFKVLSDTVGLESKLMVGLPNDGVPDCADSYKHLSVLVVLNSVELLVDLMRFPGQLYPQSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSERVDIDSAEREENLLFHRRHEASSNLSGISLRNSMLRSNVILDNKLSLSHSEPNIATAFGRRSRRRVIAEQRTASSSPEHPSFRARARSMLSGDRKTFRDFADDGATSSYRSDGAPSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQRDDSSFSHSPTDRSSGGNLQKNVSNFHLGHDERSLYSLNHDQETSQKAMSLPSSPHEYRGEASGRSGPSGYGVSNELQATWNKVLESPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEITILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHSSGQKKKLSWRRRLKMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTDSPIKDSSSAGTPEWMAPELIRSEPFTEKCDIFSLGVIMWELCTLNRPWEGVAPERVIYAVANEGSRLEIPEGPLGRLITDCWAEPHERPSCEDILSRLLDCEYSLC 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0798 816 Pfam Protein tyrosine and serine/threonine kinase 561 808 IPR001245 GO:0004672|GO:0006468
Lele11g0798 816 MobiDBLite consensus disorder prediction 493 523 - -
Lele11g0798 816 MobiDBLite consensus disorder prediction 461 476 - -
Lele11g0798 816 MobiDBLite consensus disorder prediction 445 460 - -
Lele11g0798 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Lele11g0798 816 MobiDBLite consensus disorder prediction 1 20 - -
Lele11g0798 816 MobiDBLite consensus disorder prediction 392 418 - -
Lele11g0798 816 CDD STKc_MAP3K-like 566 808 - -
Lele11g0798 816 MobiDBLite consensus disorder prediction 1 23 - -
Lele11g0798 816 SMART serkin_6 560 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0798 816 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 334 808 - -
Lele11g0798 816 Gene3D Transferase(Phosphotransferase) domain 1 639 814 - -
Lele11g0798 816 MobiDBLite consensus disorder prediction 445 476 - -
Lele11g0798 816 Pfam Ethylene-responsive protein kinase Le-CTR1 59 253 - -
Lele11g0798 816 ProSitePatterns Protein kinases ATP-binding region signature. 566 587 IPR017441 GO:0005524
Lele11g0798 816 MobiDBLite consensus disorder prediction 36 57 - -
Lele11g0798 816 Gene3D Phosphorylase Kinase; domain 1 553 638 - -
Lele11g0798 816 ProSiteProfiles Protein kinase domain profile. 560 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0798 816 SUPERFAMILY Protein kinase-like (PK-like) 534 808 IPR011009 -
Lele11g0798 816 FunFam Serine/threonine-protein kinase isoform 1 550 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0798 Lele-ChrLele11 8065803 8076839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0798 1 816 MAP Kinase Kinase Kinase AT3G58640 70.940 0.0 1189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lele11g0798 PK_Tyr_Ser-Thr 9.5e-62 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0798 11 8065803 8076839 Lele11g0798 11 8065803 8076839 ECH
Lele09g0793 09 6270833 6279369 Lele11g0798 11 8065803 8076839 hybridization
Lele10g0721 10 5503670 5518173 Lele11g0798 11 8065803 8076839 hybridization