Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0793 ATGTCCGAGAATATATACTACATATCTGACGCCATATCTGACGACGACAAGAGCCAAGGTACTGAAATGGAAGCGAGACCTAACAAGAAACGGTCATTCTTGGACTTGATTAATGAAGAAGCTGTGGTGGGTGACCATGGAGAGACGAGTACTATTGATGATAGATCGTGGTCTCCACAAGGGAATATGAGCAGCAATAACTCAAGCACAGATCAAGTGAGAGAACGAACAACGAGTGTTAGGCAATATGTGAGGTCTAAAATGCCAAGGCTTCGTTGGACTCCTGATCTTCATCTCGCTTTTGTGCTTGCTATTGAAAGGCTTGGTGGACAACAAAGAGCAACTCCCAAGCTGGTTCATCAGCTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAAAGTCATTTGCAGATGTATCGAAGTAAAAAGAGTGATGAGTCTGGCCAAGTGTTGTCTCAAAATAGGGGAATGCAAGGAAGAGCACACATGGTGGCGATGTACGAAAGATATAATAAAGGCCAAAGCCACTTTGGGATAGATAACAGAAACTACCAACCAGCATCCGGGTTAATGAAACATCCGTATGATTTCAAAGCCCCAGCCTCTTCAAGATTTCTGCCATGTGGGATAGTGAACAACCAGTGGACAAAATCAAGTTCAGAGTGGAGAAATATTAAGGGGATAGGGAAATCACACCTATTTGATATAAGGGATGCAATAACAAGAAGTGGATCTATTGGATGCAGAGAATTTATGGAAGAAAATAGATGGCCTCATGGTGAAATAGTCGGAGTTGGATCACAAGTCATAGTGGAACCTAATAATAATTCACCTCTATGGAGAACCAAAACTAGTTCTTGTGCTCCAGTCTTTTCGTCAACTCGTGCGCAATTTGTTGCTAAGGTTCATGATATAAAAGATGGAATCATGAGATGTATAAATGAGGAAGAGCAATGGCGAGCAGGTGATGAGGTGAAAGCCCAATCAGAGAGGTTGAAGGAGAAGATCAAAGGGTCAAGTTTCTTAGAGTTAAGTTTAAGCCATCATGATTTTGGAAACGTTAGAGAGAAGAACAACGCCTCATCATATCCAGAAAATAACGATCAAGTTAATACGAAGCTTTCTCTTTCGTTGTTGTGA 1143 0.4147 MSENIYYISDAISDDDKSQGTEMEARPNKKRSFLDLINEEAVVGDHGETSTIDDRSWSPQGNMSSNNSSTDQVRERTTSVRQYVRSKMPRLRWTPDLHLAFVLAIERLGGQQRATPKLVHQLMNVRGLSIAHVKSHLQMYRSKKSDESGQVLSQNRGMQGRAHMVAMYERYNKGQSHFGIDNRNYQPASGLMKHPYDFKAPASSRFLPCGIVNNQWTKSSSEWRNIKGIGKSHLFDIRDAITRSGSIGCREFMEENRWPHGEIVGVGSQVIVEPNNNSPLWRTKTSSCAPVFSSTRAQFVAKVHDIKDGIMRCINEEEQWRAGDEVKAQSERLKEKIKGSSFLELSLSHHDFGNVREKNNASSYPENNDQVNTKLSLSLL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0793 380 Gene3D - 88 145 - -
Lele11g0793 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 68 176 - -
Lele11g0793 380 MobiDBLite consensus disorder prediction 10 31 - -
Lele11g0793 380 MobiDBLite consensus disorder prediction 15 31 - -
Lele11g0793 380 SUPERFAMILY Homeodomain-like 87 145 IPR009057 -
Lele11g0793 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 145 IPR017930 -
Lele11g0793 380 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 144 IPR006447 GO:0003677
Lele11g0793 380 MobiDBLite consensus disorder prediction 44 77 - -
Lele11g0793 380 MobiDBLite consensus disorder prediction 53 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0793 Lele-ChrLele11 8026206 8030030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0793 77 150 G2-like Transcription Factor Family AT2G42660 72.973 3.65e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele11g0793 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0793 11 8026206 8030030 Lele29g0628 29 3823378 3837244 CCT
Lele11g0793 11 8026206 8030030 Lele30g0770 30 12084090 12089488 CCT
Lele11g0793 11 8026206 8030030 Lele31g0914 31 16561967 16567687 CCT
Lele11g0793 11 8026206 8030030 Lele32g0612 32 3772810 3778581 CCT
Lele11g0793 11 8026206 8030030 Lele11g0793 11 8026206 8030030 ECH
Lele09g0790 09 6232479 6236721 Lele11g0793 11 8026206 8030030 hybridization
Lele10g0718 10 5470310 5472055 Lele11g0793 11 8026206 8030030 hybridization