Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0790 ATGTCTGGAGTTGGGCATATTAGTCAAGATTGGGAGCCGGTAGTGATACGGAAGAAAGCTCCGACCGCCGCCGCCAAGAAGGACGAGAAAGCCGTCAATGCAGCTCGCCGCGCTGGTGCCGAGGTCGAGACGTTTAAGAAATATAATGCTGGGTCAAACCAGGCTGCTTCTAGTAAAACTTCACTGAACATTAAGAGGCTGGATGAAGATACGGAGAATCTAGCTCATGAACGTGTGCCAACTGAACTCAAGAAAGCTATTATGCAAGCTCGGATGGATAAGAAACTTACCCAGTCACAGCTTGCTCAGATGATCAATGAGAAACCTCTAGTGATTCAGGAGTACGAATCAGGAAAAGCCATTCCAAACCAACAGATAATTAGCAAGCTGGAGAGGGCCCTTGGTGCCAAACTGCGCGGCAAGAAATAG 429 0.4825 MSGVGHISQDWEPVVIRKKAPTAAAKKDEKAVNAARRAGAEVETFKKYNAGSNQAASSKTSLNIKRLDEDTENLAHERVPTELKKAIMQARMDKKLTQSQLAQMINEKPLVIQEYESGKAIPNQQIISKLERALGAKLRGKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0790 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 138 IPR010982 GO:0003677
Lele11g0790 142 CDD HTH_XRE 85 135 IPR001387 -
Lele11g0790 142 Pfam Helix-turn-helix 87 137 IPR001387 -
Lele11g0790 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 9 142 - -
Lele11g0790 142 SMART mbf_short4 86 141 IPR001387 -
Lele11g0790 142 FunFam Multiprotein bridging factor 1 71 142 - -
Lele11g0790 142 Gene3D - 71 142 IPR010982 GO:0003677
Lele11g0790 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Lele11g0790 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0790 Lele-ChrLele11 8005798 8008140 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lele11g0790 MBF1 1.5e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0790 11 8005798 8008140 Lele11g0790 11 8005798 8008140 ECH
Lele09g0788 09 6213381 6214806 Lele11g0790 11 8005798 8008140 hybridization
Lele10g0716 10 5448834 5451059 Lele11g0790 11 8005798 8008140 hybridization