Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0788 ATGGAGATGCATGGGTATAGAAGGAAGGCACAGATTGCACTAATCGCCATTATAGTGCTTACTTCTCTAGCTGTGATCGCATTGTTAGTTGCCTTCATTTACTATTGCTACAGAAGGAACAAGTCTTACAAGCGCCGTGAGAACCAATCATATGCTGATCATAACGGGAAAAGTGACTTTGCAAATCTGCAAGTTGTTGCTGATAATGGGCTTCAAGTGTTCACTTACATGCAGTTGCATTCTGCAACTAATGGCTTTAGCAAGACAAATATAATTGGCCATGGCGGATTCGGACTTGTTTACCGGGGAGTGCTCAACAATGGCAGGAATGCTGCAATTAAATTCATGGATGAGGCAAGAAAGCAAGGAGGAGAAGAATTCAAAATAGAGGTGGAATTGCTCGGTCAATTGCGCTGCCCATATTTGCTGAAATTGCTTGGGTATTGCTCTGATAGTAATCATAAATTGCTGGTTTATGAGTTCATGGCAAATGGGAGTCTGCAAGAACATCTTTATCCTGTCAGAAATTCTTATGTCACACCCATGAAATTGGATTGGAATACAAGGTTAAGAATAGCCCTAGAGGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTGAGTCCCCCAGTTATCCACAGAGATTTTAAGAGCAGTAACATCCTCTTAGACAAACAATTTCATGCAAAAGTTTCAGACTTCGGATTAGCCAAACTTGGATCTGTTAAAGCCGGGGGACATGTTTCGACTCGCGTTTTGGGCACACACAGATATGTTGCCCCTGAATATGCATTAACTGGGCACTTAACAACCAAATCAGATGTTTACAGTTATGGCGTTGTACTTCTCGAACTGTTAACTGGTCGAGTACCAGTTGATATGGAGAGACCTCAGGGGGAAGGTGTTCTTGTTTCTTGGGCCTTGCCCTTATTGAATGATAGAGGAAATGTTTCAAAGATAGTGGATCCTACATTGGAAGGTCAGTACTCAATGAAAGAAGTTGTCCAGGTAGCCGCCATTGCTGCACTGTGTGTTCAATCAGAAGCAGATTATAGGCCTCTCATGGCAGATGTTGTGCAGTCATTGACTCCACTGGTGAAGAACCACAGGGCAACATCCTCAAAGGTTGGTAACAACCCCAGTTTCCATGTCAACAAGTTATCCCCACCTCAGAATTCAGTCAAAGCAACTATGTAA 1197 0.4269 MEMHGYRRKAQIALIAIIVLTSLAVIALLVAFIYYCYRRNKSYKRRENQSYADHNGKSDFANLQVVADNGLQVFTYMQLHSATNGFSKTNIIGHGGFGLVYRGVLNNGRNAAIKFMDEARKQGGEEFKIEVELLGQLRCPYLLKLLGYCSDSNHKLLVYEFMANGSLQEHLYPVRNSYVTPMKLDWNTRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKQFHAKVSDFGLAKLGSVKAGGHVSTRVLGTHRYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMERPQGEGVLVSWALPLLNDRGNVSKIVDPTLEGQYSMKEVVQVAAIAALCVQSEADYRPLMADVVQSLTPLVKNHRATSSKVGNNPSFHVNKLSPPQNSVKATM 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0788 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Lele11g0788 398 SUPERFAMILY Protein kinase-like (PK-like) 69 362 IPR011009 -
Lele11g0788 398 ProSiteProfiles Protein kinase domain profile. 86 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0788 398 PANTHER OS07G0668900 PROTEIN 57 373 - -
Lele11g0788 398 FunFam Receptor-like serine/threonine-protein kinase ALE2 162 379 - -
Lele11g0788 398 Gene3D Phosphorylase Kinase; domain 1 46 161 - -
Lele11g0788 398 CDD STKc_IRAK 92 365 - -
Lele11g0788 398 FunFam Serine/threonine-protein kinase PBS1 53 161 - -
Lele11g0788 398 Gene3D Transferase(Phosphotransferase) domain 1 162 386 - -
Lele11g0788 398 MobiDBLite consensus disorder prediction 370 398 - -
Lele11g0788 398 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Lele11g0788 398 Pfam Protein kinase domain 87 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0788 Lele-ChrLele11 7997942 8000452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0788 4 398 Receptor kinase-like Gene Family AT3G58690 70.380 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele11g0788 Pkinase 9.3e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0786 09 6205539 6208630 Lele11g0788 11 7997942 8000452 hybridization
Lele10g0714 10 5439644 5443197 Lele11g0788 11 7997942 8000452 hybridization