Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0785 ATGTCAAGATCGTATACAAATCTTTTGGATTTGGCTTCAGGGAATTTCCCAGCAATGGGTAGGGAGTCTAAAGAAAGAAAGCGGCTGCCAAGAGTTATGACTGTCCCGGGGATAATTTCAGAACTCGATGATGATCAGGCACATAGTGTTTCTTCTGATAATCCATCAACTGTTTCTACAGATAGGATTATCATTGTAGCTAACCAGCTTCCTTTGAAAGCAAAGCGAAAGGAGGACAATAAGGGGTGGAGTTTCACTTGGAATGAAGATTCGTTGCTTTTACAGCTTAAAGATGGATTTCCTGAAGAGATGGAGGTTCTTTATGTTGGGTCATTGCGGGTTGATGTTGATCCAGCCGAACAGGATGACGTGTCACAGTATTTATTGGATAAATTCAATTGTGTTCCTACTTTTCTGCCCCCTGATGTTTTGACTAAATTTTATGATGGTTTCTGCAAAGGGCAAATATGGCCACTGTTTCATTACATGTTACCTTTTTCAACTGACAAAAACAACCGGTTTGATCGCTCTCTGTGGGAAGCCTATGTGATGGCAAATAAGATATTTTTTCAGAAGGTAGTTGAGATAATAAACCCAGAGGATGATTATATTTGGATTCATGATTATCATTTGATGGTGCTGCCAACTTTTATTAGAAGACGCTTTAACAGGGTGAAAATGGGATTTTTTCTGCATAGCCCCTTTCCATCTTCAGAAATGTATAGGACTCTTCCTGTGAGGGAAGAGATACTTAAAGCTTTACTTAATTCTGATATCATTGGTTTCCACACCTTTGACTATGCTCGTCATTTCTTGTCCTGTTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGCTACTTAGGATTGGAATATTATGGAAGGACTATAAGTATTAAGATTATGCCAGTTGGGGTTCACATGGATCGTATTAAAACAGTCATGAGAATGGCAGATGAAGAGTCTAAAGCAAAGGAGCTGAAACAGCAATTTGAAGGAAAAACTGTCTTGCTTGGTGTTGATGATATGGACATTTTTAAAGGTATTGATTTGAAGATTTTGGCTATGGAGCAGATGCTTAGTCAACATCCTAAATGGCAAGGAAGAGCTGTTTTGGTCCAGATAGTAAATCCTGCTAGGGGTAATGGTATACATCTAGAGGGCGTACGGGCTGACATACAAGAAAGCTGCAACAGGATTAACAGAGTATTTGGGCGTCCTGGTTATGAACCTATTGTATTTATAGATAGACCAGTTTCTGTTGCAGAAAAAGCTGCTTATTATAGCATTGCTGAATGTGTTATTGTCACAGCTGTAAGAGATGGGATGAACCTAACCCCTTATGAATATATTGCTTGTAGACAAGAAATGCCTAGTTCTGAATTATGCACTAATGCCAATGGGTCAAAGAGCATGCTAGTGATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCTATCCGTGTTAATCCATGGAATGTTGAAACAACTGCAGAGGCAATGAATGAGGCCATCTCAATGCCTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATTATCGATATGTTAGCACTCATGATATGGCTTATTGGTCGCGTAGTTTCTTACATGATATGGAGAGGGCTTGCTCGGACCTTCTGCGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTCAGAGTTGTGGCACTTGATCCTAATTTTAGAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCGAAGAGTAGGGCCATTTTGTTGGACTATGATGGCACTGTTATGCCACAGAACTCTATTAATAAGAGTCCAAGTCCAGAGGTCATCACTATTTTGAACACACTCAGTGCAGACTCCAAAAATGTAGTTTTCATTGTTAGTGGGAGGGGGAGGGATAGCTTAAGTAACTGGTTTTCTCCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGATACTTCTTGAGGTGGTCTCAGTGTGAAGAATGGGAAATTTGTGGAAAGAGCTCTGATTTTGGCTGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGGCAACTGATGGTTCTGGCATTGAAAAAAAGGAAAGTGCTTTGGTATGGCAATACCGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCCAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAACCTGTTGCTGTGAAGAGTGGTCAGTTCATTGTGGAAGTAAAGCCCCAGGATGTGAGCAAAGGCTTAGTTGCAGAAAAGATCTTCTCTTCAATTGATGCTCAAGGGAAACAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCGGATGAGGATATGTTTGAAATAATTAGTAGTGCTATCTCTAGAAATATTCTTTCTGCCAATTGTGCCGTGTTCGCTTGCACAGTTGGACAAAAACCGAGCAAAGCCAAGTATTATTTGGATGATACGACTGAAGTCATTAGCATGCTAGAATCTTTAGCTGAAGAATCTGATTCTGCTTAG 2538 0.407 MSRSYTNLLDLASGNFPAMGRESKERKRLPRVMTVPGIISELDDDQAHSVSSDNPSTVSTDRIIIVANQLPLKAKRKEDNKGWSFTWNEDSLLLQLKDGFPEEMEVLYVGSLRVDVDPAEQDDVSQYLLDKFNCVPTFLPPDVLTKFYDGFCKGQIWPLFHYMLPFSTDKNNRFDRSLWEAYVMANKIFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEMYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMDRIKTVMRMADEESKAKELKQQFEGKTVLLGVDDMDIFKGIDLKILAMEQMLSQHPKWQGRAVLVQIVNPARGNGIHLEGVRADIQESCNRINRVFGRPGYEPIVFIDRPVSVAEKAAYYSIAECVIVTAVRDGMNLTPYEYIACRQEMPSSELCTNANGSKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMPDGEKQLRHEKHYRYVSTHDMAYWSRSFLHDMERACSDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSPEVITILNTLSADSKNVVFIVSGRGRDSLSNWFSPCKKLGIAAEHGYFLRWSQCEEWEICGKSSDFGWMQIAEPVMKLYTEATDGSGIEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSSIDAQGKQADFVLCVGDDRSDEDMFEIISSAISRNILSANCAVFACTVGQKPSKAKYYLDDTTEVISMLESLAEESDSA 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0785 845 TIGRFAM T6PP: trehalose-phosphatase 588 839 IPR003337 GO:0003824|GO:0005992
Lele11g0785 845 CDD GT20_TPS 62 544 IPR001830 GO:0003824|GO:0005992
Lele11g0785 845 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 840 IPR001830 GO:0003824|GO:0005992
Lele11g0785 845 Pfam Glycosyltransferase family 20 62 544 IPR001830 GO:0003824|GO:0005992
Lele11g0785 845 Pfam Trehalose-phosphatase 594 828 IPR003337 GO:0003824|GO:0005992
Lele11g0785 845 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 55 314 - -
Lele11g0785 845 FunFam Alpha,alpha-trehalose-phosphate synthase 316 528 - -
Lele11g0785 845 CDD HAD_TPP 592 831 - -
Lele11g0785 845 Gene3D - 590 693 IPR023214 -
Lele11g0785 845 Gene3D - 719 845 IPR023214 -
Lele11g0785 845 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 845 - -
Lele11g0785 845 Gene3D Glycogen Phosphorylase B; 55 317 - -
Lele11g0785 845 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 547 - -
Lele11g0785 845 SUPERFAMILY HAD-like 591 839 IPR036412 -
Lele11g0785 845 Gene3D Glycogen Phosphorylase B; 318 529 - -
Lele11g0785 845 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Lele11g0785 845 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 593 795 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0785 Lele-ChrLele11 7970585 7974719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0785 1 845 Trehalose Biosynthesis Gene Families AT1G06410 76.596 0.0 1358