Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0784 ATGGAAGGAAAGTATCAGAGTAAACTTGACAACGAAGAGGTAAGTGAAATCATGAACACCAATTCCAACAATCTCACACCTTTACCTGGTGCTCGCCGATCTGTTGTAAGAGCTTATGATAACAACCAGAGTGGTAGCTACGACGAGACGCCTGCGTTTTACCCATCATTTTCTATCCAAGCTACTCCTGATGACAGGATTTCAGGCGTGCAAGATGCGCCAAGGTTGATGGAAGACAGAAGAACACTTTCAGGATTCAACCGCACACCCAGTTTTCCAACACAAGCACATGGCAGACAACAAATTAATGGATTCAATGGGAGCATAATAAGAAGGGGATTGAACCCCATGTTGGGAGAGATTGTGCAGCAATCACCTCCTCCAAGAACAGTAGAAAATCCCAATTCAGCAGTTTTGAGCAAGCTAAAGAAAGAACTATATGAGCCCGCAAAGATTTCACCAAAGAGGGTGAGTTTATGTTACAAAGACAGTGTCGCAAATGCTTTAAGAGAGAGAGAGAGAGAGAAGCAAGAGCGTCGCAAGAGGTGTGCTGTTTGCTTGGAAGATTTTGAACCTCGAGAAGAGGTTATGATCACACCATGCAAACATGTGTTTCATGAGGATTGTATTGTACCATGGGTAACAAGCAAAGGCCAATGCCCAGTTTGTAGGTTTGTGATTTCTGAGGAGACGAGACAGCAAACTTCATCCTTCAACATGGCCATGACGAGACCCAGTGACGTTCTAATTGCAGGGGAGCTTCTATCAATTTTCAGAACCATGCAAGACGCTCTCGAAATGGGCAATGGAACTTCGTAA 819 0.442 MEGKYQSKLDNEEVSEIMNTNSNNLTPLPGARRSVVRAYDNNQSGSYDETPAFYPSFSIQATPDDRISGVQDAPRLMEDRRTLSGFNRTPSFPTQAHGRQQINGFNGSIIRRGLNPMLGEIVQQSPPPRTVENPNSAVLSKLKKELYEPAKISPKRVSLCYKDSVANALREREREKQERRKRCAVCLEDFEPREEVMITPCKHVFHEDCIVPWVTSKGQCPVCRFVISEETRQQTSSFNMAMTRPSDVLIAGELLSIFRTMQDALEMGNGTS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0784 272 SMART ringv_2 182 224 IPR011016 GO:0008270
Lele11g0784 272 Pfam Ring finger domain 182 224 IPR001841 -
Lele11g0784 272 CDD RING-H2_PA-TM-RING 183 224 - -
Lele11g0784 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 167 241 IPR013083 -
Lele11g0784 272 FunFam RING/U-box superfamily protein 167 241 - -
Lele11g0784 272 SMART ring_2 183 223 IPR001841 -
Lele11g0784 272 ProSiteProfiles Zinc finger RING-type profile. 183 224 IPR001841 -
Lele11g0784 272 SUPERFAMILY RING/U-box 182 234 - -
Lele11g0784 272 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 91 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0784 Lele-ChrLele11 7968592 7969942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0784 96 269 C3H Transcription Factor Family AT3G58720 39.474 9.36e-36 127