Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0781 ATGGGTTTTATAAGGTCGAAAGAAGTAGTTCATGGTTTAGGGTTCTTGTGTCTGTTAATGTTGGTGCAGAAGGGTGGTGCCTATGAGTTCGTAGTCGGTGGCCAGAAGGGTTGGAGCATCCCAAGTGATCCCAATTATAATCCCTACAATCAATGGGCTGAAAGTAGCCGATTCCAAATCGGAGACTCCATAGTGTTCAACTATCAATCAGGACACGACTCCGTGCTTCAAGTGAAGAGCGAAGACTACGCTAATTGCAATACGAACTCACCTATTGCAAAATACTCAGAGGGACACACAGTGATTAAGTTTAATAAGTCAGGGGCTCACTATTTCATTAGTGGGAAAAAAGAGAACTGTCTCAAGAACGAGAAGGTCATCGTCATCGTCTTGGCTGACCGGTCAGGCCGATCCAACACCACGACCACTTCTCCTCCGCCTTCACCTTCTGCTCCTTCGCCCTCGCCCATCAGTCAGCAGACTCAGTCTCCACCGCCGGCCGCTTCAACCCCGCCAACTCCTTCTCCAGCAAGTGATCACACTCCTTCGCATAATGCGGCGTCTTCTCCTATCTCCTTCTCCTTCGCCGGAACTGTTGCCGCATTCTTGGCTTCTGCCACTCTGATCTCTTTCAGTCTCTAA 642 0.4922 MGFIRSKEVVHGLGFLCLLMLVQKGGAYEFVVGGQKGWSIPSDPNYNPYNQWAESSRFQIGDSIVFNYQSGHDSVLQVKSEDYANCNTNSPIAKYSEGHTVIKFNKSGAHYFISGKKENCLKNEKVIVIVLADRSGRSNTTTTSPPPSPSAPSPSPISQQTQSPPPAASTPPTPSPASDHTPSHNAASSPISFSFAGTVAAFLASATLISFSL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0781 213 SUPERFAMILY Cupredoxins 27 131 IPR008972 -
Lele11g0781 213 Gene3D - 28 143 IPR008972 -
Lele11g0781 213 FunFam Early nodulin-like protein 9 28 142 - -
Lele11g0781 213 CDD OsENODL1_like 28 131 IPR041846 -
Lele11g0781 213 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Lele11g0781 213 MobiDBLite consensus disorder prediction 145 178 - -
Lele11g0781 213 PANTHER BLUE COPPER PROTEIN 28 158 IPR039391 GO:0009055
Lele11g0781 213 Pfam Plastocyanin-like domain 38 122 IPR003245 GO:0009055
Lele11g0781 213 MobiDBLite consensus disorder prediction 136 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0781 Lele-ChrLele11 7855373 7856607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0781 9 193 Phytocyanin Superfamily AT3G20570 50.526 4.75e-56 175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0781 11 7855373 7856607 Lele11g0781 11 7855373 7856607 ECH
Lele10g0706 10 5338872 5340137 Lele11g0781 11 7855373 7856607 hybridization