Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0742 ATGGGCCTTCTTCCTTATTCCTTGAGTATCTTCATTCTTTTCATTCTCCTACTCCTCAAGCCTTCCACAGCAGCTGATTCCCTTGGCAAGTCCGAATCTATCAGAGACAATGGAACCACCTTGGTTTCAAAAGATGGAACCTTTGAACTTGGTTTCTTCACTCCTGGTTCTTCCAATTCCAACAGACGTTACCTTGGTATTTGGTACAAGAAAATCCCGGTTCAAACCGTTGTCTGGGTTGCAAACCGCCTCAACCCAATCAACGATTCATCATCTGTTACCTTAACAATGACCACTTCCGGCAATCTTGTCCTGTCCCAAAACAACACTGTTCTTTGGTCAACAAATTCCACCGCAAAAGCACAGAGTCCAACCGCCCGGCTCTTGGATTCTGGAAATCTTGTGGTGATAGATGAGAACGAAGAAGCAGACCCAGATTCTTATTTATGGCAAAGCTTTGACTTTCCCTCTGATACGTTATTGCCTGGTATGAAATATGGATGGGACTTAAGAACTGGTTGGCAATGGTATTTAACGGCTTGGAAGAGCCCAGATGATCCATCTCCTGGAGATTTAACCAGCGTTGAAGTGCTTCATGGCTATCCAGATTCGTATTTAATGAAGGGAAACAAAAGATTCTACAGATTTGGACCATGGAATGGTTTACATGGGAGTGGTGGTCCGGAAATAAAGCCGAACCCTGTTTTTCAATTCACGTTCGTTAACAATAAGGATGGAATCTACTACGTGGATCTTTTGAATAACAATTCTGTGTTGACAAGGTTGGTGTTGAACCAAACAGAATCTGCTCGGTATCGTTATGTATGGCTGGAAACTACAAAAACATGGCAAGTTTATTCGACGAAGCCAATAGATTACTGTGATACTTATGGTCTCTGTGGACCAAATGGGAATTGTATCATTAATGAATCGCCGGTGTGCCAATGCTTGAAAGGTTTTACCCCTAAGTCACCGGGAAATTGGAATTCTGTGGACTGGGCTGATGGGTGTGTTCGCAACAATCCTCTGAACTGCTCAGAAAAAGATAAACATGGGTTCTTTAAATTCAAGGGCTTGAAGGTGCCAGACACTACACATTCTTGGCTTGACAAGACAATGAATCTAGAGCAATGCAGAAGGAAGTGTTTGGAGAATTGTTCTTGCACTGCCTATACTAATTCAGATATCACAGGGGGAGGTAGTGGTTGTGCCTTATGGTTTGATGATCTTATTGATGTCAGATACTATGCTTCTGGGGGACAGGATTTGTATGTCCGAATGGATTCTTCAGAACTAGAACCTGGCAATAAAAAGAAGTTGACAATGATCGTTATTATCACCGTTGGTGCAATTTTTGGTATGCTTTTAGGTGGGGGCTATATCTTCTATAGAGTCCGCAGAAACAGGATTGCTAAATCAAAAGATAATGTAAGAGCTGATATTTCATATAGTGAGAATCCAGAGGATGATGTAGAACTCCCCTTGTTTGATCTTGCAACAGTAGCAACTGCCACAGGTAACTTCTCGAACAAGAACAAGATTGGAGAAGGTGGATTTGGACCTGTTTATTGGGTAATTCAACATCTGAAATATAAACTGAGAACAATTTGCCGTGGATCTAAAAGCAATGGATACATGGCACCGGAATATGCTGCAGATGGACTATATTCGGTGAAATCCGATGTCTTCAGTTATGGCATATTGGTATTGGAGATTATATGTGGAAAGAAAAATAGAGGGTTTTATCTGGATAACTTCAAGCACAACCTTATCGGTTATGCATGGATACTGTGGAAAGAAGGAAGGGTTTTAGAATTGATTGATAAGAACATAGAGGAGACTTGCAGTGTATCAGAAATATTAAGATGCATTCATGTGAGTTTATTGTGTGTGCAGCAACATGCAGAAGATAGGCCCACCATAGCATCTGCAGTTTTGATGTTGGAAAGTGAAGTTGAACTTCCTCAGCCTAAAGAACCTGGTTTCTTCCATGGGAAGGATTCGATTGAACCGAATACCTCCAACTCAAGTCAAAAGCAAAGTAGCTCAGCCAATGAAGTGACAATGAGCTTACTTGAAGCCAGATGA 2088 0.4148 MGLLPYSLSIFILFILLLLKPSTAADSLGKSESIRDNGTTLVSKDGTFELGFFTPGSSNSNRRYLGIWYKKIPVQTVVWVANRLNPINDSSSVTLTMTTSGNLVLSQNNTVLWSTNSTAKAQSPTARLLDSGNLVVIDENEEADPDSYLWQSFDFPSDTLLPGMKYGWDLRTGWQWYLTAWKSPDDPSPGDLTSVEVLHGYPDSYLMKGNKRFYRFGPWNGLHGSGGPEIKPNPVFQFTFVNNKDGIYYVDLLNNNSVLTRLVLNQTESARYRYVWLETTKTWQVYSTKPIDYCDTYGLCGPNGNCIINESPVCQCLKGFTPKSPGNWNSVDWADGCVRNNPLNCSEKDKHGFFKFKGLKVPDTTHSWLDKTMNLEQCRRKCLENCSCTAYTNSDITGGGSGCALWFDDLIDVRYYASGGQDLYVRMDSSELEPGNKKKLTMIVIITVGAIFGMLLGGGYIFYRVRRNRIAKSKDNVRADISYSENPEDDVELPLFDLATVATATGNFSNKNKIGEGGFGPVYWVIQHLKYKLRTICRGSKSNGYMAPEYAADGLYSVKSDVFSYGILVLEIICGKKNRGFYLDNFKHNLIGYAWILWKEGRVLELIDKNIEETCSVSEILRCIHVSLLCVQQHAEDRPTIASAVLMLESEVELPQPKEPGFFHGKDSIEPNTSNSSQKQSSSANEVTMSLLEAR 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0742 695 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Lele11g0742 695 MobiDBLite consensus disorder prediction 668 689 - -
Lele11g0742 695 MobiDBLite consensus disorder prediction 658 695 - -
Lele11g0742 695 CDD PAN_AP_plant 342 426 - -
Lele11g0742 695 Gene3D Transferase(Phosphotransferase) domain 1 498 658 - -
Lele11g0742 695 SMART ntp_6 348 427 IPR003609 -
Lele11g0742 695 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 153 - -
Lele11g0742 695 ProSiteProfiles PAN/Apple domain profile. 345 428 IPR003609 -
Lele11g0742 695 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 528 653 - -
Lele11g0742 695 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 535 639 - -
Lele11g0742 695 CDD TM_EGFR-like 439 472 - -
Lele11g0742 695 Pfam PAN-like domain 345 413 IPR003609 -
Lele11g0742 695 SMART blect_4 32 156 IPR001480 -
Lele11g0742 695 Pfam S-locus glycoprotein domain 214 324 IPR000858 GO:0048544
Lele11g0742 695 Gene3D - 21 153 IPR036426 -
Lele11g0742 695 ProSiteProfiles EGF-like domain profile. 290 326 IPR000742 -
Lele11g0742 695 Pfam D-mannose binding lectin 76 182 IPR001480 -
Lele11g0742 695 SUPERFAMILY Protein kinase-like (PK-like) 542 680 IPR011009 -
Lele11g0742 695 CDD B_lectin 37 156 IPR001480 -
Lele11g0742 695 CDD EGF_CA 291 324 - -
Lele11g0742 695 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 187 IPR036426 -
Lele11g0742 695 Pfam Domain of unknown function (DUF3403) 651 695 IPR021820 GO:0004674
Lele11g0742 695 Pfam Protein tyrosine and serine/threonine kinase 544 644 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0742 Lele-ChrLele11 7042412 7046375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0742 513 662 Receptor kinase-like Gene Family AT4G23230 45.033 2.17e-35 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele11g0742 PK_Tyr_Ser-Thr 4.7e-08 CL0016