Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0740 ATGGCGGAAGATCAATTTCAAGCCACCGGAAACTGGTTGGACTCAGCCAGAAACTCCACCACCAGGTTCGAAACTGATGCTTCTCAATCGTCCTCCTCCATCCCCAACTTCGCCTGGCAACATACAGATATGTCGTCGCCGTCGCATGACCTTAAGCCAAGGTCGTCTTCCATGTCGGCTTCACCTTCTTCCTCCGACCCCAACTTGCACATGATGGGTTTAGGCCTCTCTTCCCAACAACCTCTCGACTGGAATAATCAACCCTCCTTTCTTCAAGGTGCAGAGAAAGGTGGAGAGAGCGGTTTCTTGAATCCATCAAGCACTAATTTTCAAGAAGAAAGTGCGATAATGGGGTTGTCTCATCATGTTCGATGGAGGGATAAGTTGTTTTCTGCGGAGTCATCTTCTTCAACGAACGAGTTCAAACAAGTGAACCGGCCGGGTTTCTCTTTGGATCAAACTCAGTTCAGTCCTCAATATAATTCTGGGGAAAATACTGTAACAACCCAACAAGGCTTAGCTTCTAGTAATACTAACTTTCAGATGGATTTGTATGGGAACTCATCCATATTACAAGGATTATTAGGACCTGATCATCATAATAACAATAATCAAGTTCAGTATGATGATCATCATCAGAATCGGCAGATGAACTTCCCATACCAACAATCTTCAAGCTACGGATTTAACAGTAACGATCAGTTAATTCCTTCATGGTCTAAAGTTCCTCAATTTCTCAGAGCGTCACCTCCAAAACAACAACAACCACCTCATCATAATAATAACAATCAGTTGCATTTCACAAACAACGCTCCTTTCTGGAACGCAGCTTCTGGGGCCTCCAACATTAAAGATGATAGATCTGGTGCTGGCTTCTTTCCCTCTTTGCAACCTCCATTCCCATCTCCAAGCTTCGATGTTCAATCCAAGAATATGTGTGAAGTTAGGGAGTCGAGTAGCATGGTGAAGAAAAGTGGGAGCGAGGCGGCGGCAAACAAAAGGCCTCGGAACGAAACTACTCCATCTTCTTTACCAGCGTTTAAGGTAAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTTCAACAATTGGTTTCGCCTTTCGGAAAGACTGATACAGCCTCGGTGCTGTCTGAAGCCATTGTATACATCAAATTCCTCCATGAACAAGTGACAGTTTTAAGTACACCGTATATGAAAAGTGGAGCTCCCATACAGCAGCATCAACAGAGTCCTGGTAAATCTAAAGAAAGTGGTGAAGGTAGTGGAAACCAAGATCTGAGAAGCAGAGGGCTATGTCTGGTGCCAGTTTCGAGTACATTTCCAGTCACTCAAGAAACCGCAGTTGATTTTTGGACGCCAACCTTCGGAGGAACATTCAGATAA 1386 0.4444 MAEDQFQATGNWLDSARNSTTRFETDASQSSSSIPNFAWQHTDMSSPSHDLKPRSSSMSASPSSSDPNLHMMGLGLSSQQPLDWNNQPSFLQGAEKGGESGFLNPSSTNFQEESAIMGLSHHVRWRDKLFSAESSSSTNEFKQVNRPGFSLDQTQFSPQYNSGENTVTTQQGLASSNTNFQMDLYGNSSILQGLLGPDHHNNNNQVQYDDHHQNRQMNFPYQQSSSYGFNSNDQLIPSWSKVPQFLRASPPKQQQPPHHNNNNQLHFTNNAPFWNAASGASNIKDDRSGAGFFPSLQPPFPSPSFDVQSKNMCEVRESSSMVKKSGSEAAANKRPRNETTPSSLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIVYIKFLHEQVTVLSTPYMKSGAPIQQHQQSPGKSKESGEGSGNQDLRSRGLCLVPVSSTFPVTQETAVDFWTPTFGGTFR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0740 461 MobiDBLite consensus disorder prediction 1 77 - -
Lele11g0740 461 MobiDBLite consensus disorder prediction 402 428 - -
Lele11g0740 461 MobiDBLite consensus disorder prediction 402 425 - -
Lele11g0740 461 Gene3D - 348 410 IPR036638 GO:0046983
Lele11g0740 461 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 387 IPR011598 GO:0046983
Lele11g0740 461 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 405 IPR036638 GO:0046983
Lele11g0740 461 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 117 442 - -
Lele11g0740 461 MobiDBLite consensus disorder prediction 276 295 - -
Lele11g0740 461 FunFam Transcription factor bHLH123 family 348 411 - -
Lele11g0740 461 MobiDBLite consensus disorder prediction 316 347 - -
Lele11g0740 461 MobiDBLite consensus disorder prediction 247 269 - -
Lele11g0740 461 MobiDBLite consensus disorder prediction 316 344 - -
Lele11g0740 461 CDD bHLH_AtbHLH_like 344 395 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0740 Lele-ChrLele11 6998958 7001037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0740 265 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 63.366 1.45e-66 217
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0740 11 6998958 7001037 Lele11g0740 11 6998958 7001037 ECH
Lele09g0735 09 5570031 5572098 Lele11g0740 11 6998958 7001037 hybridization
Lele10g0673 10 5022012 5024131 Lele11g0740 11 6998958 7001037 hybridization