Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0724 ATGGCTACTACAGAGCTAGACAGCTCACGTGCTTCACGCGTGCACGATAGCCACCACACAACAGATGACGACGAGGATTACAGCGTCACAGACAGCATGGACGACACGGAGGAGGAGACGGATGAAGAAGAAGAGTCCAACGGAAGAGACGACGGTGACAAGGCGGTGGGGTGGCGCTGGTGGAGGAAAGGCGTGATCGGAGGATGCGGCGGCGGGAAGGTGTTGGACCCGAGGGCCAAGTGGGTTCAAGAATGGAACAGGGTGTTCTTGCTGGTGTGTGCGATGGGTTTGTTCGTGGACCCACTCTTCTTCTACGCCCTATCGGTGAGCGACACGTGCATGTGCCTCTTCGTCGACGGATGGTTCGCCGTCACCGTGACGGCGCTCCGCTGCATGACGGACGCCTTGCACCTCTGGAACATGTGGCTGCAGTTCAAAATGGGCAGACGCCACTTCGGAAGTGGTCTTGCCGTCAGTACAAACCGTCGCTTGGCGGCTCTTCGCTATCTCAAGGTCAAGACCGGCTTCTTCTTCGACCTCTTCGTCATCCTCCCTCTACCACAGATTGTGCTATGGGTAACAATACCGTATCTGCTGGAGAAAGGGTCAGTGACATTGGTGATGACGGTGTTCTTAATAATGTTTCTGTTTCAATATCTTCCAAAGATCTATCACTCTGTTTGCCTCTTGCGACGCTTGCAAAACCTCTCCGGCTACATCTTTGGCACTGTTTGGTGGGGCATTGCCCTCAATATGATCGCCTATTTCGTCGCCTCCCATGCAGCAGGGGCATGCTGGTACTTGCTAGGGATTCAGAGGGCAGCAAAGTGTCTGAAAGAGCAGTGTGGGAGAACAAATGGGTGTGGTTTAAGGATACTGTCTTGTAAGGAACCAATATATTATGGAACAAGTGGGATGGTGAGGGATAGAGCAAGACTGTCATGGGCAGAGAACAGGCAAGTCAGGTCAACGTGCTTGGCTAGCTCTGATAACTACAACTACGGAGCTTATAAATGGACCGTTCAGCTTGTCACCAACGATAGCCGACTCGAAAAGATACTCTTCCCTATCTTCTGGGGCCTCATGACTCTCAGCACTTTCGGGAACCTGGAGAGCACAACGGAATGGCTAGAAGTGGTGTTCAACATCATTGTTTTGACCAGTGGACTTATTCTCGTCACCATGTTGATTGGAAACATTAAGGTGTTTCTGCATGCAACGACATCAAAGAAGCAGGCGATGCAACTGAGGATGAGGAACATAGAATGGTGGATGAGGAAGAGGCACCTTCCTACTGGGTACCGGCAGCGCGTGCGTAACTACGAACGGCAGCGATGGGCGGCGACGCGCGGAGTCGACGAATTCGAGATGATCAGAAACCTGCCGGAGGGCCTCCGAAGAGACATCAAGTACCATCTCTGCTTGGACTTGGTCCGACAGGTTCCATTATTTCAGCACATGGATGAACTGGTGCTAGAGAACATCTGCGACCGTGTGAAGTCACTCATATTCACTAAGGGAGAAACAATAACCAGAGAGGGAGATCCAGTTCAGAGAATGTTGTTCGTGGTGAGGGGTCATCTTCAGAGCAGTCAAGTGCTAAGAGACGGCGTGAAAAGTTACTGCATGTTAGGCCCGGGGAACTTCAGCGGCGACGAGCTACTCTCGTGGTGTCTGAGGAGGCCGTTCATAGAGCGGCTGCCGCCGTCATCGTCGACGCTCAGAACACTGGAAACGACGGAGGCGTTTGGCCTGGAAGCGGAGGACGTGAAGTACGTGACGCAGCACTTCAGGTACACGTTCCTGAACGAGAAGGTGAAGAGGAGCGCCAGGTATTACTCGCCAGGATGGAGAACTTGGGCGGCCGTCGCCATACAGCTGGCGTGGCGGAGGCACAAGCATCGTTTGACGTTGGCGTCGTTGTCGTTCATAAGGCTCCGAAGGCCGGTGTCTAGGTGCTCGTCCCTCGGAGAAGACAGGCTTCGACTCTACACGGCCTTGTTGACCTCACCAAAGCCTAATCAGGATGATTTTGACTATTGA 2043 0.5316 MATTELDSSRASRVHDSHHTTDDDEDYSVTDSMDDTEEETDEEEESNGRDDGDKAVGWRWWRKGVIGGCGGGKVLDPRAKWVQEWNRVFLLVCAMGLFVDPLFFYALSVSDTCMCLFVDGWFAVTVTALRCMTDALHLWNMWLQFKMGRRHFGSGLAVSTNRRLAALRYLKVKTGFFFDLFVILPLPQIVLWVTIPYLLEKGSVTLVMTVFLIMFLFQYLPKIYHSVCLLRRLQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKEQCGRTNGCGLRILSCKEPIYYGTSGMVRDRARLSWAENRQVRSTCLASSDNYNYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLILVTMLIGNIKVFLHATTSKKQAMQLRMRNIEWWMRKRHLPTGYRQRVRNYERQRWAATRGVDEFEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLRTLETTEAFGLEAEDVKYVTQHFRYTFLNEKVKRSARYYSPGWRTWAAVAIQLAWRRHKHRLTLASLSFIRLRRPVSRCSSLGEDRLRLYTALLTSPKPNQDDFDY 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0724 680 SUPERFAMILY Voltage-gated potassium channels 77 404 - -
Lele11g0724 680 CDD CAP_ED 483 589 IPR000595 -
Lele11g0724 680 MobiDBLite consensus disorder prediction 9 26 - -
Lele11g0724 680 FunFam Cyclic nucleotide-gated ion channel 1 410 474 - -
Lele11g0724 680 Gene3D Jelly Rolls 481 599 IPR014710 -
Lele11g0724 680 SMART cnmp_10 483 612 IPR000595 -
Lele11g0724 680 MobiDBLite consensus disorder prediction 1 54 - -
Lele11g0724 680 ProSiteProfiles cAMP/cGMP binding motif profile. 483 593 IPR000595 -
Lele11g0724 680 Gene3D Helix hairpin bin 408 474 - -
Lele11g0724 680 SUPERFAMILY cAMP-binding domain-like 409 597 IPR018490 -
Lele11g0724 680 Pfam Cyclic nucleotide-binding domain 504 591 IPR000595 -
Lele11g0724 680 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 51 640 - -
Lele11g0724 680 FunFam cyclic nucleotide-gated ion channel 4 481 599 - -
Lele11g0724 680 MobiDBLite consensus disorder prediction 27 48 - -
Lele11g0724 680 Pfam Ion transport protein 85 400 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0724 Lele-ChrLele11 6845479 6850919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0724 72 679 Ion Channels AT5G54250 80.806 0.0 1022