Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0723 ATGATGTTGTCGCCTACGCCTTCAGCGATAGCGAGAAGCTCGCTAGAAGAAATGCTTGAATCAATCCGGCGGAGGGGAGAAGACGAGAGGCCGAAGGGCCTGCCGCCGGCATTGCCATCTCGTCCAACGTCAAGAGCTCGGCTTCCCTCAGCGAGACGGTCGTTGCCGAGTAAATTTAGGTCTGAAGGTGATCAGGATGCAACAACAAGATTCCAGGATAATTCCAATGCAGAGGAGGCAAAAGAAGAGACCAAGAAGAAAGAAGGGGATGTGGGACATAAGAGAAAAGGAAGTTTTGCGAGCAAGAAGATGAAGCAAGACATGGAGTCCCCTTATATCGTAACATCGGAAGAGAATATAAACCAAACTTCGTCAGAAGACCCTGTTTCAGCATCTACTGCTTCCATAACAACATCAGGGAAGATTCACCGTTTGGATGGTGATGACAATGTTGCTTATTACATAAAAAAGAAACTACGTGTTTGGTGTATGCCGCCAACTGAAAAGTGGGCACTAGGAAATATACAATCAACTTCAGGAGAAGAAGCTTTTGTTTCGCTCTCAAACGGAGATATAATGAAAGTGGCAAGATCAGAGCTTTTACCAGCTAATCCAGACATTCTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAGCCCTCAGTTCTTCATAATCTCCGGTTTAGATATTATCAGGACATGATATATAATAAAGCAGGACCTGTTTTAATTGCCCTCAACCCCTTCAAAGATATCCGGATGTATGGAAATGATTATATCTCGGCTTATAGGCAGAAGGCTACGGACAGTCCTCACGTGTATGCTATAGCAGATGTGGCTTTTAATGAGATGATGAGAGATGAAGTAAACCAATCCATTATTATAAGTGGCGAGAGTGGAGCCGGGAAGACAGAGACGGCAAAGTTTGCCATGCAATACTTTGCAGCTTTAGGTGGCAGCAGTTGTGGGATAGAAAAGGAAGTCCTTCAGACGAATATTATACTAGAAGCTTTTGGGAATGCGAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAGATTCATTTCAGCACGTTGGGGAGGATATGTGGGGCCAAAATTCAAACCTGTAAGCCTGTTCAATCAAGAGTTGTTCAACTGGCCAGCGGTGAGAGGTCGTATCATATCTTTTATCAACTTTGTGATGGTTCTTCGCCCGATCTTAAAGAGAGACTGAATCTTAAAGCTGCTAGTGAATATAAATATCTCAATCAAAGTGACTGCATGACAATTGATGGTGTTGATGATGCTAAAAAGTTACATAAGCTAATGAAAGCACTGGATGATGTTCGAATTTGCAAAGAGGATCAAGAGCTAGTCTTCAAGATGATTGCAGCCATACTATGGCTAGGAAATATATCATTCCGAGTAACGGACAATGACAATCACATTGAGGTTGTAGACGATGAAGCTGTTATCAATGCTTCCCTGCTAATGGGTTGCAGTTCCCAGGACTTAATGGTAACTTTATCTACTCGGAAAATCAAAGCTGGAAAAGATACTATTGCCAAAAAGTTGACATTGTGCCAGGCAACTGACACAAGGGATGGATTGTCAAAGTTCATATACGCAAGCTTGTTTGACTGGCTTGTAGAACAAATTAACAAGTCGCTTGAAGTGGGTAAACGTTGCACTGGAAGATCCATAAGTATCCTTGATATCTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTCTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTATTTAAACTTGAGCAGGAAGACTATGAATTGGATGGCGTTGATTGGACAAAAGTAGATTTTGAGGACAATCAAGAGCGCTTGGATCTTTTTGAGAAGAAACCTCTGGGGCTGATCTCTCTGTTGGATGAGGAAACAAATTTCCCCAAGGCTACCGATCTAACATTTGCCAACAAACTTAGACAGCACCTGAAAGCTAATCCTTGTTTCAAAGGGGAAAGAGGCGGAGCTTTTCGTGTTCGCCATTATGCGGGGGAGGTTTCGTATGACACAAAAGGATTTCTAGAAAAGAACAGAGATCCGCTGCCTCCAGATTCCATTCAACTCCTGTCATCATGCAATAGTCAACTGCTGAAGTTGTTCTCCAAAATGACCGATCAGTCTAAGCAGTCAAATTCCTCCCACTTTGGCGCATTGGGTTCACAAAAGCAGAGTGTCGGGACAAAGTTCAAGGGCCAATTATTCAAGCTGATGAATGAGTTGGAGGGCACCACACCTCACTTTATTCGCTGCATAAAGCCCAATACTAGGCACCTTTCCGGAATATATGATGAGGACCTTGTCTTACAACAGCTCAGGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGGCTGGATATCCCACTAGAATTATGCATCAAGAGTTTGCCAGAAGGTATGGGTTTTTGCTTTCTGAGGCCAGCGTATCTCAGGATCCATTAAGCATCTCAGTTTCTGTTTTACAACAGTTTAATATCCCTGCCGAAATGTACCAAGTCGGCTACACAAAACTGTATCTCCGAACAGGGCAGATTGGTGTCCTGGAGGATAGGAGGAGACAGATTCTAGTGGGAATACTTGGGGTTCAAAAATGGTTACGTGGTCATCAAGCTCGCCGAAACTTTAAAGTCCTCAAGAATGGAGCAATAGGCTTACAATCAATTGTTCGGGGAGAGATTGCAAGAAAGACATATCAGGCGAAGCAGTCTGCTGCATCTGTTGCTGCTGAAAAGCTTCAGCAGGCCCAGGCAATCACACGTTTACAATCTGTGATCCGGGGATGGTTGGTTCGAAGGCGTGCTAGTAGTCTCATTCATAAGTTGAAGAAAGATGTTAAAAACGTTAAATATAAGCAGAAGTCACGTTCTAAGACGTCAGAAGTGAAGGATTTGTCCAAAGAGCAGGTTCAGAATCTGCTATCAACTTTGGCAGAACTCCAGAACCGGGTTGGCAAATCTGAAGCAACTGTGAAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAACTAAAACAATTTGAGACAAGGTGGATTGAGTATGAGATGAAGATGAAATCAACGGAACAGATGTGGAAAAAACAGATGACATCTTTGCAAAAGAGTGTTTCTGTTGCTAAGAGCCTTGCTACTGAGAATTCCACTGATCAACCAGGAAGATATGACGCTATGTCACCTGGCTTCTATGACTCAGAAGATGCTACTTCCATTGAATCTAGAACACCCACGGGCAGCACTCCTATCAAGTTTCCTAGCACTCCTTATGAGAATGGAGCAAGGAGAGAGGCTAAAGATACTTTCAATGCAGTCAGCAATCTCATGAAAGAATTCGAGCAGCGGAAACAGACTTTTGATGCTGATGCCAAAGCTCTACTTGCAGTTAAATCAGGACACCCTGCCCACACGAATCCCAACGACGAACTCAAGCAGCTTAAACGCAGATTTCAAGGATGGAAGAAAGAATACAAGGGCCGATTACGGGAAGCAAAAGCTAAACTTACTAAGACAGGGAGTCCAGAAGCCGAAATTAGTTGTCAAAAGTGGTGGGGGAAGATAAGCTCAAGAGGACAATAG 3648 0.4304 MMLSPTPSAIARSSLEEMLESIRRRGEDERPKGLPPALPSRPTSRARLPSARRSLPSKFRSEGDQDATTRFQDNSNAEEAKEETKKKEGDVGHKRKGSFASKKMKQDMESPYIVTSEENINQTSSEDPVSASTASITTSGKIHRLDGDDNVAYYIKKKLRVWCMPPTEKWALGNIQSTSGEEAFVSLSNGDIMKVARSELLPANPDILEGVDDLIQLSYLNEPSVLHNLRFRYYQDMIYNKAGPVLIALNPFKDIRMYGNDYISAYRQKATDSPHVYAIADVAFNEMMRDEVNQSIIISGESGAGKTETAKFAMQYFAALGGSSCGIEKEVLQTNIILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGRICGAKIQTCKPVQSRVVQLASGERSYHIFYQLCDGSSPDLKERLNLKAASEYKYLNQSDCMTIDGVDDAKKLHKLMKALDDVRICKEDQELVFKMIAAILWLGNISFRVTDNDNHIEVVDDEAVINASLLMGCSSQDLMVTLSTRKIKAGKDTIAKKLTLCQATDTRDGLSKFIYASLFDWLVEQINKSLEVGKRCTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNQERLDLFEKKPLGLISLLDEETNFPKATDLTFANKLRQHLKANPCFKGERGGAFRVRHYAGEVSYDTKGFLEKNRDPLPPDSIQLLSSCNSQLLKLFSKMTDQSKQSNSSHFGALGSQKQSVGTKFKGQLFKLMNELEGTTPHFIRCIKPNTRHLSGIYDEDLVLQQLRCCGVLEVVRISRAGYPTRIMHQEFARRYGFLLSEASVSQDPLSISVSVLQQFNIPAEMYQVGYTKLYLRTGQIGVLEDRRRQILVGILGVQKWLRGHQARRNFKVLKNGAIGLQSIVRGEIARKTYQAKQSAASVAAEKLQQAQAITRLQSVIRGWLVRRRASSLIHKLKKDVKNVKYKQKSRSKTSEVKDLSKEQVQNLLSTLAELQNRVGKSEATVKQKEEENTALREQLKQFETRWIEYEMKMKSTEQMWKKQMTSLQKSVSVAKSLATENSTDQPGRYDAMSPGFYDSEDATSIESRTPTGSTPIKFPSTPYENGARREAKDTFNAVSNLMKEFEQRKQTFDADAKALLAVKSGHPAHTNPNDELKQLKRRFQGWKKEYKGRLREAKAKLTKTGSPEAEISCQKWWGKISSRGQ 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0723 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 930 IPR027417 -
Lele11g0723 1215 Gene3D Kinesin motor domain 208 811 IPR036961 -
Lele11g0723 1215 PANTHER MYOSIN 202 1202 - -
Lele11g0723 1215 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 156 205 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele11g0723 1215 CDD MYSc_Myo8 223 866 IPR036022 -
Lele11g0723 1215 ProSiteProfiles IQ motif profile. 939 968 IPR000048 GO:0005515
Lele11g0723 1215 MobiDBLite consensus disorder prediction 112 138 - -
Lele11g0723 1215 MobiDBLite consensus disorder prediction 1 138 - -
Lele11g0723 1215 SMART MYSc_2a 203 879 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele11g0723 1215 ProSiteProfiles IQ motif profile. 883 906 IPR000048 GO:0005515
Lele11g0723 1215 FunFam Myosin IE heavy chain 449 557 - -
Lele11g0723 1215 SMART iq_5 902 924 IPR000048 GO:0005515
Lele11g0723 1215 SMART iq_5 879 901 IPR000048 GO:0005515
Lele11g0723 1215 SMART iq_5 938 960 IPR000048 GO:0005515
Lele11g0723 1215 PRINTS Myosin heavy chain signature 568 596 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele11g0723 1215 PRINTS Myosin heavy chain signature 239 258 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele11g0723 1215 PRINTS Myosin heavy chain signature 621 649 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele11g0723 1215 PRINTS Myosin heavy chain signature 293 318 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele11g0723 1215 PRINTS Myosin heavy chain signature 336 363 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele11g0723 1215 Pfam Myosin head (motor domain) 211 866 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele11g0723 1215 MobiDBLite consensus disorder prediction 1090 1110 - -
Lele11g0723 1215 ProSiteProfiles IQ motif profile. 903 931 IPR000048 GO:0005515
Lele11g0723 1215 Gene3D - 392 448 - -
Lele11g0723 1215 MobiDBLite consensus disorder prediction 75 103 - -
Lele11g0723 1215 FunFam Myosin heavy chain 392 448 - -
Lele11g0723 1215 Gene3D Myosin VI head, motor domain, U50 subdomain 449 557 - -
Lele11g0723 1215 ProSiteProfiles Myosin motor domain profile. 209 878 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele11g0723 1215 MobiDBLite consensus disorder prediction 1090 1116 - -
Lele11g0723 1215 MobiDBLite consensus disorder prediction 17 34 - -
Lele11g0723 1215 Gene3D - 812 879 - -
Lele11g0723 1215 Coils Coil 1118 1138 - -
Lele11g0723 1215 Pfam IQ calmodulin-binding motif 941 958 IPR000048 GO:0005515
Lele11g0723 1215 Pfam IQ calmodulin-binding motif 906 924 IPR000048 GO:0005515
Lele11g0723 1215 Pfam IQ calmodulin-binding motif 886 901 IPR000048 GO:0005515
Lele11g0723 1215 Gene3D - 885 932 - -
Lele11g0723 1215 Gene3D - 580 768 - -
Lele11g0723 1215 Coils Coil 987 1035 - -
Lele11g0723 1215 FunFam Unconventional myosin-XIX 580 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0723 Lele-ChrLele11 6823024 6831070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0723 1 1209 Myosins gene family AT5G54280 61.259 0.0 1511