Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0708 ATGGAGAGCACCGACTCATCCTCCGGTTCCCAGCAACCGAACCTGCCGCCCGGGTTCCGGTTCCACCCCACCGACGAGGAGCTCGTCGTTCACTACCTCAAGAAGAAGGTCTCCTCCGCTCCCCTCCCCGTGGCCATCATCGCCGAGGTCGATCTCTACAAGTTCGACCCCTGGGAACTCCCTGCTAAGGCCACGTTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCGAGGGACAGGAAGTACCCGAACGGAGCGAGGCCAAACAGGGCAGCCACATCTGGGTATTGGAAGGCAACAGGAACGGATAAGCCTGTGCTTACATCCAATGGAAACCAAAAGGTGGGAGTGAAGAAAGCTTTGGTGTTTTACGGAGGGAAACCACCAAGAGGCATCAAAACCAACTGGATCATGCACGAATATCGCATCGTCGATAATAAGCCTAACAATAAGCCTCCTGGTTGTGACTTTGGCAACAAGAAAAACTCTCTACGGCTGGACGACTGGGTGCTGTGCCGAATCTACAAGAAGACCAACACACAGAGATCGGCGGTGGATCAGGAAAGGGACGATTCAATGGATGATATGATTGGGTTTGGAGGGGTGCCTCCTTCGATCAACGAGGGCCAAATGACTGCGAGGTTTCACCTTTCCAAGTTGTCCACATTAAGCTATGGTGGAACCGCATTAATGGATCATCATCATGACCAGAACTTGCTGGAAGGGGTTATATCGAGCAGCAACAACAATAAAGGATTATCAGATCTTCAACAACTTCCCTTTATGCCAACCATGACTGCTTCCACTGCCTCTAATTCAAACACGAAACGAACGCTCTCGTCGCTGTATTGGCCGAGCAATAACAACGAAGGCGAGGACGTGAATGGCACAAAAAGGCTGGGTTTGGATGAGGATCATCATCATCACAATACCAACAACAACAACGAAGTTGGTAGTAACTCCATAGCCACCTTGCTTAACCAGATTCCTCACACTCCTTCATTGCACCACCAAACAATGCTTAACTCATACCCATATTCCATACCTGGAATGAATTGGTATACTTGA 1065 0.5005 MESTDSSSGSQQPNLPPGFRFHPTDEELVVHYLKKKVSSAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSNGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRIVDNKPNNKPPGCDFGNKKNSLRLDDWVLCRIYKKTNTQRSAVDQERDDSMDDMIGFGGVPPSINEGQMTARFHLSKLSTLSYGGTALMDHHHDQNLLEGVISSSNNNKGLSDLQQLPFMPTMTASTASNSNTKRTLSSLYWPSNNNEGEDVNGTKRLGLDEDHHHHNTNNNNEVGSNSIATLLNQIPHTPSLHHQTMLNSYPYSIPGMNWYT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0708 354 MobiDBLite consensus disorder prediction 295 311 - -
Lele11g0708 354 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Lele11g0708 354 SUPERFAMILY NAC domain 9 176 IPR036093 GO:0003677|GO:0006355
Lele11g0708 354 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lele11g0708 354 PANTHER NAC TRANSCRIPTION FACTOR 56 15 230 - -
Lele11g0708 354 MobiDBLite consensus disorder prediction 1 17 - -
Lele11g0708 354 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Lele11g0708 354 MobiDBLite consensus disorder prediction 281 317 - -
Lele11g0708 354 FunFam NAC transcription factor 56 24 181 - -
Lele11g0708 354 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0708 Lele-ChrLele11 6716737 6718168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0708 1 354 NAC Transcription Factor Family AT3G15510 52.910 1.17e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele11g0708 NAM 5.4e-40 No_clan