Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0707 ATGGGAGTGCCAGAAACCGACCCGCTCGCTCAATTGACCCTACCTCCGGGTTTTCGGTTTTACCCGACTGACGAGGAGCTTCTGGTTCAGTATCTATGCCGGAAGGTGGCCGGCCACCATTTCTCTCTGCAAATCATTGGCGAAATTGACCTTTACAAATTCGACCCATGGGTTCTTCCAAGCAAAGCCACCTTTGGCGAGAAAGAATGGTACTTCTTTAGCCCGAGAGACCGAAAGTACCCGAACGGATCCCGACCCAACAGGGTCGCCGGGTCTGGGTACTGGAAAGCTACCGGAACCGACAAAATCATCACCACCGCTGGTCGGAAGGTTGGCATAAAGAAAGCTCTCGTTTTCTATGTTGGAAAAGCCCCGAAAGGTACCAAAACCAATTGGATCATGCACGAGTACCGCCTCGTCGATTCCTCCCGAAAGAGCGGAAGCACCAGGCTCGATGATTGGGTTCTGTGTCGGATTTATAAGAAGAACTCCAGCTCTCAGAAGGCAACGCCTATGATGGTTCCAGTGAAAGAATACGAATACAGTAACGGGTCGTGTTCGTCATCGTCGTCCCCCTTGGACGACGTGCTGGAATCGTTGCCAGAAATCGACGACCGGTGTTTCGCGCTGCCACGTGTGAGCTCGCTGAAGACGTGGCAGCAGGAGGAGAAGCTGAATCTTCAGAATCTGAATGGAGGTAATACTTTCGTGGAGTGGGCCAACCCGGCGGTTCTGCACTCGGTGGCGGAGTTCTTTTCCGGGCACAATCAAACGCAGACCCAATCTCAATCTCAAGGGATGCTGAACTACAGTTCAATGAGCGATGTGCAGCATGTCCCATCAATCCCTCCGCTGACGGTGCCCGAGGAGGAGGTCCAGAGCGGAGTGAGCAGTTCCGGGTTTTATCAACAAAGTTCAAATGCGTTCCCGCAGGGATTCGGGAACTCAGTGAATGACCCGTATGGATTCGGATACCCGAATCAGACAATGGGGTACGGGTTCAGACAATGA 1011 0.5282 MGVPETDPLAQLTLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIGEIDLYKFDPWVLPSKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTAGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLVDSSRKSGSTRLDDWVLCRIYKKNSSSQKATPMMVPVKEYEYSNGSCSSSSSPLDDVLESLPEIDDRCFALPRVSSLKTWQQEEKLNLQNLNGGNTFVEWANPAVLHSVAEFFSGHNQTQTQSQSQGMLNYSSMSDVQHVPSIPPLTVPEEEVQSGVSSSGFYQQSSNAFPQGFGNSVNDPYGFGYPNQTMGYGFRQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0707 336 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 255 - -
Lele11g0707 336 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Lele11g0707 336 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Lele11g0707 336 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Lele11g0707 336 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Lele11g0707 336 FunFam NAC domain-containing protein 72-like 23 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0707 Lele-ChrLele11 6700193 6701412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0707 1 336 NAC Transcription Factor Family AT4G27410 57.183 3.26e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele11g0707 NAM 9.3e-37 No_clan