Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0690 ATGACCTTACAGACAATTCCAAATAAGTTCGCGAGAATATTTGGGAATGAACTGTCTAGTGAGGCAACGATTAGTGTTCCAGATGGTCGTATTTGGAAAATGGAACTGAAGAAGAAATCTGAAGAAAACGAGGTTTGTTTCTGCAAGGGTTGGCTGGAATTCGTGGAATACTACTCAATTAGTTTGGGGTTCTTTTTAGTGTTTAAAAATGAAGGCAATTCACACTTCTCTTTGCTCATCTTCGATGTGCGCGCTGCTGAGATTCACTATCCATGCAAAGATGATAACTCTGAGAAGCAGAACCCAGAATCCAAATGTGGTAGAAGAAGATCATCCAATTTTGATCAATGTGGCTACAACCCAAGAAGGAGCCAAAGGCATAAGCCGAAAGACGAAGAAGAAATAATCGACATAGATGGTGTAAGTTATAATTCTGACGAGAATTCAAGAAAGCATGACAAAAATAGGTCTGAGCCACGCAAAGCTTTGAGTAAAAAGCAAAGAGCTATAGAAGCTGCCCAGAACTTCGAACCAGCAGAACCATCATTTACTGCAATAATAAGGCCAGCTAATCTGAATCTTCGTTATCTGTGTATATATATATAG 606 0.3927 MTLQTIPNKFARIFGNELSSEATISVPDGRIWKMELKKKSEENEVCFCKGWLEFVEYYSISLGFFLVFKNEGNSHFSLLIFDVRAAEIHYPCKDDNSEKQNPESKCGRRRSSNFDQCGYNPRRSQRHKPKDEEEIIDIDGVSYNSDENSRKHDKNRSEPRKALSKKQRAIEAAQNFEPAEPSFTAIIRPANLNLRYLCIYI 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0690 201 CDD B3_DNA 5 82 IPR003340 GO:0003677
Lele11g0690 201 PANTHER B3 DOMAIN-CONTAINING 6 174 - -
Lele11g0690 201 MobiDBLite consensus disorder prediction 144 162 - -
Lele11g0690 201 ProSiteProfiles B3 DNA-binding domain profile. 1 84 IPR003340 GO:0003677
Lele11g0690 201 MobiDBLite consensus disorder prediction 93 162 - -
Lele11g0690 201 MobiDBLite consensus disorder prediction 121 137 - -
Lele11g0690 201 Gene3D - 2 85 IPR015300 -
Lele11g0690 201 MobiDBLite consensus disorder prediction 93 110 - -
Lele11g0690 201 SMART B3_2 2 84 IPR003340 GO:0003677
Lele11g0690 201 SUPERFAMILY DNA-binding pseudobarrel domain 5 82 IPR015300 -
Lele11g0690 201 Pfam B3 DNA binding domain 5 80 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0690 Lele-ChrLele11 6553182 6553787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0690 6 192 B3 DNA Binding Superfamily AT3G18990 28.205 2.31e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele11g0690 B3 6.7e-10 CL0405