LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele11g0676	ATGGAGTCTCCTACATCTCTCAACTTCCCCCTCCTCTTCCTCCTTCTCTCCCTTCTCTCTCTCTCCCATGCTCGTAACTTCTATGTCGGTAACACGGACGGTTGGGTCTTGAACCCCTCTGAGAGTTACAGTCAATGGTCTTCTCGAAACAGATTTCAGGTCAATGACGTTCTCGTGTTTAAGTACCAGAAGGGTTCGGACTCGGTGTTGGAGGTGAGCAAGGAGGATTACGACAAGTGTAATACAAAGAACCCTGTCAAGAAGTTTGAAGATGGTGATTCGCAGTTCACGCTTGATCGATCTGGACCTTTCTACTTTATCAGTGGACATGATGGTAATTGTGACAAGGGTCAGAAGTTGATTGTTGTTGTGTTGTCTGTCCGATCATCATCACCGGGAACGCCGTCACCTGGTACTCCTCCGGGAACTCCCTCTACTCCCAAAGCTCCTTCTCCTTCTGGAGGAGGCACCCCTGGTTCACCTCCAGGATCTCCGGTGACCACTCCTACCGTTCCATCCCCGTCTGGTAACCCTCCGTCGTCCACCCCGGCATCTCCTTCACCAGGAAGTTCTCCCACAGCTCCGTCCACGTCGCCCGTTCCACCATCTCAGGCACCGGGAGGCTCCACGACAACGCCATCTCCGGGGAACAGTCCTCCGGTGGGTACTTCTCCTTCCACCACACCATCTTCGCCAACTATGGCGCCGGCCAATGCACCTGGACAATCATCTCCGGTGAGTAACTCTCCATCCATGACACCCAACGCACCATCTATGGCTCCGGGAGGGTCTCCCATGGGTAATGCTCCATCCATGACACCAAACACACCATCTATGGCTCCGGGAGGATCTCCGACAGGAGCGTCTCCAATGGGCAGTCCTCCGATGGGTTCTGGATCACCGGCGATGTCTCCATCTACTTCACCAGAATCATCGTCACCTATGGGATCCCCACCGGAACCTACAGGAACCACTCCATCTGGTTCGCCGAAGCCGGGCCCAGCAGGTTCTATAGCACCCTCAACAAACAACCAATCGACACCGCCAGCTCCATCATCAGCATGGAGTGAAACTGCTCCGAACTTGTTGGGGTATGCAGTTACTATGATGGTCGGTGCTGCTCTCTGCACCAGTTTTGGTGCTAAGTAA	1149	0.5405	MESPTSLNFPLLFLLLSLLSLSHARNFYVGNTDGWVLNPSESYSQWSSRNRFQVNDVLVFKYQKGSDSVLEVSKEDYDKCNTKNPVKKFEDGDSQFTLDRSGPFYFISGHDGNCDKGQKLIVVVLSVRSSSPGTPSPGTPPGTPSTPKAPSPSGGGTPGSPPGSPVTTPTVPSPSGNPPSSTPASPSPGSSPTAPSTSPVPPSQAPGGSTTTPSPGNSPPVGTSPSTTPSSPTMAPANAPGQSSPVSNSPSMTPNAPSMAPGGSPMGNAPSMTPNTPSMAPGGSPTGASPMGSPPMGSGSPAMSPSTSPESSSPMGSPPEPTGTTPSGSPKPGPAGSIAPSTNNQSTPPAPSSAWSETAPNLLGYAVTMMVGAALCTSFGAK	382

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele11g0676	382	MobiDBLite	consensus disorder prediction	154	208	-	-
	Lele11g0676	382	Gene3D	-	23	130	IPR008972	-
	Lele11g0676	382	MobiDBLite	consensus disorder prediction	129	357	-	-
	Lele11g0676	382	PRINTS	Proline rich extensin signature	175	192	-	-
	Lele11g0676	382	PRINTS	Proline rich extensin signature	195	220	-	-
	Lele11g0676	382	PRINTS	Proline rich extensin signature	128	149	-	-
	Lele11g0676	382	PRINTS	Proline rich extensin signature	158	174	-	-
	Lele11g0676	382	CDD	OsENODL1_like	25	121	IPR041846	-
	Lele11g0676	382	PANTHER	BLUE COPPER PROTEIN	26	197	IPR039391	GO:0009055
	Lele11g0676	382	MobiDBLite	consensus disorder prediction	227	258	-	-
	Lele11g0676	382	Pfam	Plastocyanin-like domain	35	118	IPR003245	GO:0009055
	Lele11g0676	382	MobiDBLite	consensus disorder prediction	336	357	-	-
	Lele11g0676	382	FunFam	Early nodulin-like protein 1	24	129	-	-
	Lele11g0676	382	ProSiteProfiles	Phytocyanin domain profile.	25	126	IPR003245	GO:0009055
	Lele11g0676	382	SUPERFAMILY	Cupredoxins	23	125	IPR008972	-
	Lele11g0676	382	MobiDBLite	consensus disorder prediction	312	328	-	-
	Lele11g0676	382	MobiDBLite	consensus disorder prediction	268	283	-	-
	Lele11g0676	382	MobiDBLite	consensus disorder prediction	134	148	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele11g0676	Lele-ChrLele11	6446530	6447824	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele11g0676	6	254	Phytocyanin Superfamily	AT4G27520	45.552	6.75e-56	185

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele11g0676	11	6446530	6447824	Lele11g0676	11	6446530	6447824	ECH
	Lele09g0662	09	5026975	5028278	Lele11g0676	11	6446530	6447824	hybridization
	Lele10g0606	10	4463265	4464848	Lele11g0676	11	6446530	6447824	hybridization