Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0670 ATGGCTGCAAGGTTGGGGACGATAACGGCAGCTTATTGTCTGGAGGAGATGGAAGGAGAGGATCTTGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTGGCTCCCTACTGAATGGACCGACCAGTTTAATTCAGGCATTCAGACCATCGCTGTAATTCAAGCTGGCCATGGTCTTCTCCAACTTGGCTCTTGCAAGACTATTCCTGAGGACCTCCATTTTGTTCTGAGAATGAGGCATACATTTGAATCTCTGGGGTATCAATCTGGGTTCTACCTCTCACAGCTCTTCTCTTCAACAAGAAACAGCTCGTCTTCGACTTCGCTTCCTTCGAAACCGTCTTCTGCCATGCTGATTCGAGCGCCTCCTCCGCTCTTCAACTGGGGTCAAACGCCACTTGTAGCTTCGGCTGCAGCAGCTTCAATGCTATCTTCACCCAATTTTCAACACACAGCGCGAGTCGGAGGGTTCCCACAGGCGAAAGACGAGACACATGTATTTCTTATGCCTCATCATCATTCGTCGTCTGATCAACAACCTGTGGCTGCAAGAATGGAAGACATGATGGGGGAGAATGAGAATGACATAAAATGGCCAAATGGGTTGTCCTTCTTCAATGCTCTCACAGTACAAAATGATGATACTACTAAGCTTTTGTTCAATCCAGAGAGTTTGGATAACAAACCAGACGAAGCCTCGAACCCGAACCCAAACGAGTTCTTGAGCTTGGACAGCCATCACCAGACAGAAAGTGGGAGGAAAATGGACAAGTTCAAGAGGAGCTTCACTCTTCCTGCTAGAGTGGCTTCGTCTTCTTCGTCGACCTCGATGGATCATCATCATCAGCAGCAGCAGCAACAACAACCACCTGTGGAATATAGGAATTCTGAAGGAGGTATGTACCCGGATGTCATGGAGACCTTTTTGGAGTAA 954 0.4717 MAARLGTITAAYCLEEMEGEDLVRKAFSKMSIQLYNYGEGWLPTEWTDQFNSGIQTIAVIQAGHGLLQLGSCKTIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNSSSSTSLPSKPSSAMLIRAPPPLFNWGQTPLVASAAAASMLSSPNFQHTARVGGFPQAKDETHVFLMPHHHSSSDQQPVAARMEDMMGENENDIKWPNGLSFFNALTVQNDDTTKLLFNPESLDNKPDEASNPNPNEFLSLDSHHQTESGRKMDKFKRSFTLPARVASSSSSTSMDHHHQQQQQQQPPVEYRNSEGGMYPDVMETFLE 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0670 317 MobiDBLite consensus disorder prediction 253 268 - -
Lele11g0670 317 MobiDBLite consensus disorder prediction 226 252 - -
Lele11g0670 317 MobiDBLite consensus disorder prediction 272 300 - -
Lele11g0670 317 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 89 IPR025610 -
Lele11g0670 317 PANTHER GB|AAF34833.1 11 41 IPR044170 -
Lele11g0670 317 MobiDBLite consensus disorder prediction 226 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0670 Lele-ChrLele11 6398346 6400259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0670 26 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.303 6.77e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0670 11 6398346 6400259 Lele11g0670 11 6398346 6400259 ECH
Lele09g0655 09 4992378 4994547 Lele11g0670 11 6398346 6400259 hybridization
Lele10g0600 10 4428402 4430606 Lele11g0670 11 6398346 6400259 hybridization