Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0663 ATGGATAGCTACTTCCATGTCGATAATGGCGATGCTCATCTTCCACCTGGGTTTCGCTTCCACCCAACTGACGAAGAACTCATCACCTTTTACCTCCTCAAGAAGGTTCTAGACAACACCTTCACAGGAAGAGCCATTGCTGAAGTTGATCTTAACAAGTGTGAGCCATGGGAGCTTCCTGAGAAGGCGAAGATGGGTGAGAAAGAGTGGTACTTCTTCAGCCTCCGAGATCGAAAGTACCCCACTGGTCTGCGAACAAATAGGGCTACAGAAGCTGGATACTGGAAGGCAACTGGAAAAGACAGAGAGATTTACAGCTCCAAAACTTGCTGTCTAGTTGGAATGAAGAAGACACTGGTTTTCTACCGAGGAAGAGCTCCAAAAGGAGAGAAAAGCAACTGGGTCATGCATGAGTATCGTCTTGAAGGCAAATTTGCTTATCATTACCTTTCACGCAGCTCCAAGGATGAATGGGTTATCTCGCGTGTTTTCCAGAAGAGTCTCTCCTCCACGGTGAACGGCAGCTCCGCCGTGTCTTCCGCCGGTGGATCCAAGAAGAGTAACCCGAGAATGAGCTCTTCTGTTAACATGAGCCTTTACCCAGAACCCAGTTCTCCTTCCTCCATCTATCTTCCTCCTTTGCTTGACTCGTCTCCTTACGTCGCCGTCAACGACCGTGACAGCTGCTCTTACGACGGCAGCAGCACTACTCCGAGGGAGCACGTGTCCTGTTTCTCCACATTCTCTGCGTCTGCTGCTGCCAACAACCTCTCCAATGTTAGCTATGGACTCGCTCCTCCTCCACCTCCACCGCCAGTGACTCTGGACTCATTTGGTCGATTCCAAAACAACGTCGGTATTCCTGCGTTCCCAAGCCTAAGGTCACTGCAGGAGAATCTTCAACTTCCTTTCCTGACTCCGGCGATATCTCACGGTGCCTCAGGTTGTGACATGATCAACGGATGGGCTAAGCCGGAGGAGCAGACAGTGGTGGGTGGTGGATCTTCTGGCATGTCGCTGTGTCCGTCGTCGGAGCTTGATTACATGTGGGGCGGCTACTAG 1062 0.5113 MDSYFHVDNGDAHLPPGFRFHPTDEELITFYLLKKVLDNTFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCCLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKSLSSTVNGSSAVSSAGGSKKSNPRMSSSVNMSLYPEPSSPSSIYLPPLLDSSPYVAVNDRDSCSYDGSSTTPREHVSCFSTFSASAAANNLSNVSYGLAPPPPPPPVTLDSFGRFQNNVGIPAFPSLRSLQENLQLPFLTPAISHGASGCDMINGWAKPEEQTVVGGGSSGMSLCPSSELDYMWGGY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0663 353 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 224 - -
Lele11g0663 353 MobiDBLite consensus disorder prediction 173 199 - -
Lele11g0663 353 FunFam NAC domain-containing protein 100-like 23 170 - -
Lele11g0663 353 Gene3D NAC domain 23 169 IPR036093 GO:0003677|GO:0006355
Lele11g0663 353 SUPERFAMILY NAC domain 10 166 IPR036093 GO:0003677|GO:0006355
Lele11g0663 353 ProSiteProfiles NAC domain profile. 14 166 IPR003441 GO:0003677|GO:0006355
Lele11g0663 353 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0663 Lele-ChrLele11 6344410 6346111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0663 4 305 NAC Transcription Factor Family AT5G53950 61.300 1.73e-115 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele11g0663 NAM 2.3e-40 No_clan