Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0657 ATGCGATTATCGTCCGCTTCCGGTTCGTCATTGGACCAGAGGAGACTTGATCGATCGGGGTTGCGGCTTCGGAAGAAGCACAAGAGGCTAGACGCAATATGCGAAAGAGCATATAATCGGAACCATAGTGAATTGAATGAGGATGATGACGGGGTTGGTACTTCGGGCGCTGATACAGAGCTACGCCGCAGCTCGAGGGTTCGGCGTGCTCCAGTTGTGCTCGATGTCTCTCCTCCTCCCCCTAAGAAACGACGGAAGTTAGGTAAGAATGTAATGCTGAGGAGTGTGAGCGATGTCAAGAGCCCAGAACATGTGAATCAGAGTCCTGGTAGTGTAGAACGTCCAGTAACATGGAGTTCAAGGTTGAGATCCAGGGAAAAAAATGTACGTTTCTCGGTGAAGGGGGAGAGGCAATCACCGAGTGGTAAAAGGAAGCTGTTTCAGGATATGGACGAAAGCAGGGACAATGGAAAACCAGAGGTTCCAGAGATTAATAAGAAAGAGGAATTAGAAGGCGGGATGCCGAAGGTAGTTAAGTCAAAAAGACCAGGGAGGATCAAAGCAACAAAACATGCGGAAGAGCATAAACATAATAAGTCCCATGGGAACTTAGATGAGAGCAAGAGTCAAGAAGTGGAGCTTATTTTGAGCCAAGATGAGGATAATGCTTCAATTTCAGGATCTAAATTTTCTGATGAGAATGTAGTGGAAATAGTGGATGGGAATGCCTCTCCAAAGATAGAGACTAGCGAGAGAAACATATGTGATAATTTGCAGTCGCAGGAGTCTAATGGTAATGTTGAATTGTCTCCAGCGGAACATGTAGATAAATCAGTTGATCAATTGGAGAGTGTGAAGGAAGGCGAAAATGGAAGAGATGCTGTAGAAATTGTTGAGAATCTGACAAAGCAAGTAGAAAATGAAGGATCTATCAATAAGGAATCTGCAGTTGACGAAAAGACCTTGCAAGATGAAAATATTGTAAAAATAGACAAGCCCAAACAAGCTTCAAATGATATAACTGACCAACCACGTATTAAAGAAGGCAGAAGGTGTGGTTTGTGTGGCGGAGGGACTGATGGTAAACCTCCAAAAAGGTTAGTTCAGGATAATGGTGAGAGTGAGAATGAGGCATATAGTGGGTCCTCAGCATATGAGGAGCCTAATTATGATCCTTGGGATGGTTTTGGTGATGAACCTGGCTGGCTTGGGCGTCTGTTAGGTCCTATTAATGATCGCTATGGTATTGCTGGGATATGGGTTCATCAGCACTGTGCTGTATGGAGTCCAGAGGTATATTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGGGCTGCACTTTGCAGAGGAAGGGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCTACTATTGGCTGTCGGGTCGATCGGTGTCCAAAGACGTATCACTTGCCTTGTGCAAGAGCAAATGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCCTGTACAGATCATAGACATCTCTTCCAACCTCAGGGTAATCAATATTTAGAGCGGATAAAGAAATTGAAAGCTAGGAAGGTGAAGTTGGAGATGAGAAAGCTTTCAAATGATGCTTTGAGAAAGGATATTGAAGCAGAAGAAAAGTGGTTGGAGAACTGTGGTGAGGATGAAGAATTTTTGAAACGGGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCTATATACATTGGTGGTCCTGACTCAGATGGTGAAAAATCATTTCAGGGTTGGGAATCTGTTGCTGGACTGAAGGATGTCATCAGTTGCATGAAAGAAGTTGTTATTTTACCTCTGCTCTACCCTGAGTTCTTTGATAATTTAGGTCTTACCCCTCCAAGAGGTGTTCTTTTGCATGGATATCCTGGAACAGGCAAAACTTTAGTAGTTAGAGCATTGATAGGTGCATGTGCTCGCGGTGATAAACGGATTGCATACTTTGCTCGTAAAGGTGCGGATTGCTTGGGGAAATATGTGGGTGATGCTGAACGCCAACTGAGACTTCTATTCCAGGTTGCTGAAAAATGTCAACCTTCCATAATATTCTTTGACGAGATAGATGGATTGGCACCAAGCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACACTGCTTGCTCTTTTGGATGGTTTGAAATCTAGGGGTTCAGTTGTAGTCATAGGTGCAACAAATCGGCCTGATGCTGTTGACCCAGCACTTAGGCGTCCTGGAAGGTTTGATCGGGAAATTTATTTTCCATTGCCATCAATTGAGGACAGAGCTTCCATTCTCTCGCTTCACACACACAGGTGGCCAAAACCAATCACTGGATCCTTACTTGAGTGGGTTGCGAGAAAAACTCCTGGATTTGCTGGTGCAGATCTCCAGGCTCTCTGTACCCAAGCTGCCATCAATGCTTTGAAGAGAAACTTTCCTTTGCAAGAAGTGCTGTCTGCAGCTTCAGAGGAAGATTCTGGTGGTAAGCGCCTTCCTCTGCCATCCTTTGCGGTGGAGGAAAGGGACTGGTTGGAGGCTTTATCATGTGCACCACCACCATGCTCGCGAAGAGAAGCTGGGAATGCTGCAAATGACATAGTATGCGCCCCTCTTCCCACCCACCTTATACCTTGTTTGTTGCAACCATTATGCACTCTGCTTGTATCTCTGTATCTTGATGGTCGCCCATGGTTGCCACCTCCTATTTTTAAAGCTGTAACAAGGATTAAAAGTTCAATGATTTCTGCTCTGGGCAAAAAGAAAATGTCTATTGATCAGTGGTGGGTGCATGTTGATGATTTTCTTCAAGACACAGATTTTGCTGCCAATTTAGGGAGGAAACTCACCTGTGCTGGCATTTTATCTGCAAACGATGGCCATGCTGGTTCTTGTGATTCTGTAGAGGATACTGATGGCGAGGCAAAACTTGAACCTTCTATAAAGCACCATGTCAGTACGTGTAGTGGTTTATTGTCAAATATGTCATTTATGGTGTCGAGGAAATCAGGATTTCGGATATTTATTGCTGGAAATCCAAAATCTGGTCAGAGGCATCTTGCTTCCTGCCTTCTTTACTGCTTTGTCGGTAATGTTGAAATTCAGAAGATTGATATGGCAACTATTTCGCAAGAAGGATATGGAGATGTGGTACAAGGGATTTCACATATATTAATGAAATGCGCTCATGTGCAATCATGTGTAGTCTTTATGCCAAGAATTGATCTGTGGGCTGTGGAGACTCATTTTCAGGTTGCTGAAAATTCTGATTACTGCTCCACGAATGATCAAGTTTCTGAGATGGAAGAGTCTTGTTTAACACCAAGTCAGGTTGTTGAAAAGAAAATTCAATTCAATTCAAAGAAAAGAAAATCAGTAGAGATGGCTAAAGGCCAAGTCATCTTTAGGGCTTCACATGCCTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGAGTATCTACATCCTTGATGATTCTGGCTACTTCAGATGTTCCATATTCAGAACTTCCATGTAAAGTAAGGGAGTTCTTTAGGAGTTATCAATCAAGCTGCAGCCAGTCTGCTTCATTGGTGCAGACATTGCCTCGTTTTTCTGTGCAGATGGAGGGGAACTTTAATCATGATGTTATGATCAATCTATCCACAGTAGAGCTAATGAAAAATGTAGTTGAGCAGCTGGTTCAATTGGTCCACAAAAAATCTCATATGCATATTGGAGCCCAGAAAAGGCACATAACCTGTGATTCAGTTCAAGGCTGTAAAGATAGGGCATGTCTGGGAAAAGATAGTGGATCAGTCAGTGGTGATAAGGTTAAAGTCCAACTTCCTGAACCCTCTACTAAAGTTCCAACACCACCTAACAGTAGGCCACTGAAGCAAAAGTCAACCCTGTTGTTGGCAATATCAACCTTTGGTTATCAAATTATTCGGTTCCCTCATTTTGCAGAACTTTGTTGGGTTACATCAAAACTCAAAGAAGGTCCTTCTGCTGATGTAAGTGGACCTTGGAAGGGTTGGCCTTTCAATTCCTGCATAATTCGTCCTAGTACTCTGCAAGACAACGTGGCTAATTCTTGCAGCTCTAGCAATATTAAAAACAAAGAAAAATCTGGTATTGTCAGAGGCCTGGTGGCTGTTGGTTTGTCAGCATACAGAGGTGTTTATACATCTGTTAGGGAAGTTTCTAGTGAGGTACGCAAGGTTCTTGAGATATTAGTGGGGAAAATCAACACAAAAGTTCAAGCTGGTAAAGATAGATATCAATTTCTTCGTATTCTATCGCAAGTGGCTTATTTGGAAGATATGGTCAATAACTGGGCCTATGCGTTGTTGAGTCTTGAGCAGGACTCCCCAGACCTGGCAGCAAAACTTACATCGACTAGTGTTGGGTCATTAATCAGACAAGAAAACCAACAAGTTGAAGATGAGGGTTGCCTGGTGGTTGCCCCCATGGAAGGTCGTGAGCCAGAGAAGCTGGAGAGAAGTCCCAATGCAATTGCTGCCAAGACACCGGAATCTCTTGCCTTGAATAACAGAAATGATACTGTGGATAATGTTGATCATGATGGCAAAGTTTCAGAAGGATCTCCACAAAATAGTTCTTTTTCAAATGATCATATTAACAACTCTGCTGCCATGAGCCAGCCCGTTGCTCTAGTTACAATTGTGGAGAATGGCACACTATCTAAAGTATCTGAATCAGGAACAACGGGAAATCCTGAAATGATAAATGGAGTAATTGGGCCCTTGAAAGGCTCAAATGGATCTTTGCTCGCTCACACTGTTTCTCTTTCTGGAAATGAAGAGTTCAGGTTGTCAGAAGGCTTAAATGGATCCACAGCTACCCATTCTGTTTCCCTTGCTGATAATGAACTTCGCAATGCCTGCCAACCAGAGGATGTTGAGATTGAAGACTCCAGGATAGCCTCTATCACCGTTCCCAGCTTGTCGTCAGCAGAGATTGGTATTAAATTAAGTGGTGGTAACTCTGATGTAGATGCCAATGCTGTAGAAATTAGTGACTCTCCGAGTAAAAGCAGTGATCCTGCGGAATCTGGGGTTGTCTGTTTATATCGATGTTGCCCTGGATGCCTCAACAATCTTTATCCTTTGACACGCAAAATCCTTGTTCATGAGTGTAGCTTGAATAGAAGCGGTTGGACTGTAGAAGATGTCCATGATGTTCTTGCATCATTATCTGTGGATCTTACTTCAGCAGTTAAAAAACTTTATTCTGCTGAAGATTTCAATGACTTATCCGATAAAACCTCCGGCCAGACAACGTCTGAAGTGCCTCTTGACTGTTCAAACTCGAGAATGTGTAACCCCAGAAATCTAGACAGGGCTTTTGTGCCATCTGAATGTGCATCTCACTCCACAAGCCAAGATACGGCTGGAGGCGAAGATACGGCATGGAATGGATTGAAGCTTGATTTAAAATTTGTGTTCAGAGATGGTGTACTGGTTCAAATGGACCCTGATAAAGAAGTATCTCTTCACTGTAAATTTGAGACCTTGTGCCTTTGTTCTTTTAAAGAGTTGATAGTGATGAGGAAGCACCTTTTTCGCTGA 5592 0.4322 MRLSSASGSSLDQRRLDRSGLRLRKKHKRLDAICERAYNRNHSELNEDDDGVGTSGADTELRRSSRVRRAPVVLDVSPPPPKKRRKLGKNVMLRSVSDVKSPEHVNQSPGSVERPVTWSSRLRSREKNVRFSVKGERQSPSGKRKLFQDMDESRDNGKPEVPEINKKEELEGGMPKVVKSKRPGRIKATKHAEEHKHNKSHGNLDESKSQEVELILSQDEDNASISGSKFSDENVVEIVDGNASPKIETSERNICDNLQSQESNGNVELSPAEHVDKSVDQLESVKEGENGRDAVEIVENLTKQVENEGSINKESAVDEKTLQDENIVKIDKPKQASNDITDQPRIKEGRRCGLCGGGTDGKPPKRLVQDNGESENEAYSGSSAYEEPNYDPWDGFGDEPGWLGRLLGPINDRYGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHLFQPQGNQYLERIKKLKARKVKLEMRKLSNDALRKDIEAEEKWLENCGEDEEFLKRENKRLHRDLLRIAPIYIGGPDSDGEKSFQGWESVAGLKDVISCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTHRWPKPITGSLLEWVARKTPGFAGADLQALCTQAAINALKRNFPLQEVLSAASEEDSGGKRLPLPSFAVEERDWLEALSCAPPPCSRREAGNAANDIVCAPLPTHLIPCLLQPLCTLLVSLYLDGRPWLPPPIFKAVTRIKSSMISALGKKKMSIDQWWVHVDDFLQDTDFAANLGRKLTCAGILSANDGHAGSCDSVEDTDGEAKLEPSIKHHVSTCSGLLSNMSFMVSRKSGFRIFIAGNPKSGQRHLASCLLYCFVGNVEIQKIDMATISQEGYGDVVQGISHILMKCAHVQSCVVFMPRIDLWAVETHFQVAENSDYCSTNDQVSEMEESCLTPSQVVEKKIQFNSKKRKSVEMAKGQVIFRASHAWMSFIEQVESIGVSTSLMILATSDVPYSELPCKVREFFRSYQSSCSQSASLVQTLPRFSVQMEGNFNHDVMINLSTVELMKNVVEQLVQLVHKKSHMHIGAQKRHITCDSVQGCKDRACLGKDSGSVSGDKVKVQLPEPSTKVPTPPNSRPLKQKSTLLLAISTFGYQIIRFPHFAELCWVTSKLKEGPSADVSGPWKGWPFNSCIIRPSTLQDNVANSCSSSNIKNKEKSGIVRGLVAVGLSAYRGVYTSVREVSSEVRKVLEILVGKINTKVQAGKDRYQFLRILSQVAYLEDMVNNWAYALLSLEQDSPDLAAKLTSTSVGSLIRQENQQVEDEGCLVVAPMEGREPEKLERSPNAIAAKTPESLALNNRNDTVDNVDHDGKVSEGSPQNSSFSNDHINNSAAMSQPVALVTIVENGTLSKVSESGTTGNPEMINGVIGPLKGSNGSLLAHTVSLSGNEEFRLSEGLNGSTATHSVSLADNELRNACQPEDVEIEDSRIASITVPSLSSAEIGIKLSGGNSDVDANAVEISDSPSKSSDPAESGVVCLYRCCPGCLNNLYPLTRKILVHECSLNRSGWTVEDVHDVLASLSVDLTSAVKKLYSAEDFNDLSDKTSGQTTSEVPLDCSNSRMCNPRNLDRAFVPSECASHSTSQDTAGGEDTAWNGLKLDLKFVFRDGVLVQMDPDKEVSLHCKFETLCLCSFKELIVMRKHLFR 1863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0657 1863 MobiDBLite consensus disorder prediction 28 49 - -
Lele11g0657 1863 MobiDBLite consensus disorder prediction 1271 1297 - -
Lele11g0657 1863 MobiDBLite consensus disorder prediction 100 118 - -
Lele11g0657 1863 SMART AAA_5 623 764 IPR003593 -
Lele11g0657 1863 MobiDBLite consensus disorder prediction 1 210 - -
Lele11g0657 1863 CDD AAA 621 762 - -
Lele11g0657 1863 Pfam ATPase family associated with various cellular activities (AAA) 627 762 IPR003959 GO:0005524|GO:0016887
Lele11g0657 1863 MobiDBLite consensus disorder prediction 187 210 - -
Lele11g0657 1863 Coils Coil 508 528 - -
Lele11g0657 1863 Gene3D - 763 855 - -
Lele11g0657 1863 PANTHER AAA DOMAIN-CONTAINING 25 1763 IPR045199 -
Lele11g0657 1863 ProSitePatterns AAA-protein family signature. 732 750 IPR003960 GO:0005524|GO:0016887
Lele11g0657 1863 Pfam PHD-like zinc-binding domain 422 501 - -
Lele11g0657 1863 MobiDBLite consensus disorder prediction 354 384 - -
Lele11g0657 1863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 589 855 IPR027417 -
Lele11g0657 1863 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 398 503 IPR013083 -
Lele11g0657 1863 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 347 503 - -
Lele11g0657 1863 MobiDBLite consensus disorder prediction 119 178 - -
Lele11g0657 1863 Pfam AAA+ lid domain 788 820 IPR041569 -
Lele11g0657 1863 FunFam ATPase family, AAA domain-containing 2 586 769 - -
Lele11g0657 1863 ProSiteProfiles Extended PHD (ePHD) domain profile. 391 501 IPR034732 -
Lele11g0657 1863 Gene3D - 588 864 IPR027417 -
Lele11g0657 1863 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 763 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0657 Lele-ChrLele11 6306696 6314924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0657 589 824 Calmodulin-binding Proteins AT3G56690 41.176 4.91e-45 176