Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0653 ATGGGTGGCGGAGCAAGGAAGAAACCGAAGCCTGCGCAGCTCAATCCCAACTGGATTCAACTCCAGCAAAAGCTCAAAATTCATGTCTCTGGTGCTTCAAGACCCTTCAGAGACTCCGAAACTGAGACCCCAAACTCAGTATTGGGGAAGCGGAAAGAGAGGCAAGATGAAGAGTCCAGTGATTGTGAGATTAATCCTCTTACTCCTGTAAATGATGATTCCAGTGTGACCGATGCAGTAGCCATGGACTGTGAAATGGTTGGTGTTGGTCAAGGAAACAGAAGTGCTCTTGGAAGAGTAACACTGGTTAATAGGTGGGGAAATGTTATTTATGATGAATTTGTTAGACCAGTGGAGCATGTTATTGACTTCCGCACCAAAATTAGCGGCATAAGACCTCGAAACTTGAGAAAAGCAAAGGATTTTTTGGCCGTTCAGAAGAAAGTGGCGGAGTTGATCAAAGGCAGGATCCTTGTGGGACATGCCCTGCACAATGATCTTCAGATTGTACCTGGCAGATCACATAGCAGAAGAGCACTTCGTCATCTTGCGGCTGAATATCTTGGCGCTAAGATCCAAACTAGGGAGCACTGCCCTATAGACGATGCTCGTGCGGCGATGCTGCTTTATCAAAGGAATAGAAAAGAATGGGAGAAGAGTGTAAAAGATCAAATTCGACTTAAACAGAAGCAGAATAAACGGAGGCCGAAGAAGAAGCAAAAGAAGGAAGTTTCTCCAGATGGGAATGCCGCGGGAGTGGCAATGATAATGCAAAAGATGCGAATTTCTGGTCATCGCCCATTGTTTTGTTCAGTTTACACGGCGGCCTTCAGGTCCTACGTTACCAGTTGTCGAGCCGTGCTGTTGCCACGGTTTGGCGGTCCTGAGATACGATCAGGTTATGGACGATCCATTTTTGAACCACTTTTACCAATCATTCTGAATCGTGACATAAGTGGTGAGGTTGCAGCTGTTGGAGCTTCAGTGCGATCATTGAATCCGGGACAAGAGGTTTTTGTGGTAGGTGGTGGAGGAGCAGTTGGGTTCGCTGCAATTCAGCTTGCAGTAGCTGCTGGTTGCCATGTTGCAACTACTTGTGGAAGTGAAAGCATTGATCGAATGTTAAATGCTGGTGCAGAACAGGCCGTGGACTATGTTGCTGAGGATGTTGAGTTGTCTATAAGGGGAAAATTTGATGCTGTTTTGGACACCATTGGTGTACCAGAAACAGAAAGTTATGGCATAAACTTTCTGAAGAGAAGTGGGCAATATATGACACTTCAGAGTGAGGCAGCATCATTGGCACATAGGTATGGACTAGCTATTGGGCTTCCTTTATCTGCAGCTGCTCTGTTGAAAAAACAGATTCAATACCAATCCTCTCATGGAATAGGTAAGAGATGGCAGTCTGACATAATGTTTTGCAATGACATTCAGTATCTAAAATTTATCTGCTAA 1458 0.4513 MGGGARKKPKPAQLNPNWIQLQQKLKIHVSGASRPFRDSETETPNSVLGKRKERQDEESSDCEINPLTPVNDDSSVTDAVAMDCEMVGVGQGNRSALGRVTLVNRWGNVIYDEFVRPVEHVIDFRTKISGIRPRNLRKAKDFLAVQKKVAELIKGRILVGHALHNDLQIVPGRSHSRRALRHLAAEYLGAKIQTREHCPIDDARAAMLLYQRNRKEWEKSVKDQIRLKQKQNKRRPKKKQKKEVSPDGNAAGVAMIMQKMRISGHRPLFCSVYTAAFRSYVTSCRAVLLPRFGGPEIRSGYGRSIFEPLLPIILNRDISGEVAAVGASVRSLNPGQEVFVVGGGGAVGFAAIQLAVAAGCHVATTCGSESIDRMLNAGAEQAVDYVAEDVELSIRGKFDAVLDTIGVPETESYGINFLKRSGQYMTLQSEAASLAHRYGLAIGLPLSAAALLKKQIQYQSSHGIGKRWQSDIMFCNDIQYLKFIC 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0653 485 SMART exoiiiendus 78 219 IPR013520 -
Lele11g0653 485 Gene3D - 74 237 IPR036397 GO:0003676
Lele11g0653 485 Pfam Zinc-binding dehydrogenase 346 468 IPR013149 -
Lele11g0653 485 MobiDBLite consensus disorder prediction 30 74 - -
Lele11g0653 485 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 323 465 IPR036291 -
Lele11g0653 485 Pfam Exonuclease 80 162 IPR013520 -
Lele11g0653 485 MobiDBLite consensus disorder prediction 221 248 - -
Lele11g0653 485 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 43 231 - -
Lele11g0653 485 CDD REX4_like 80 211 IPR037431 GO:0006364|GO:0008408
Lele11g0653 485 SUPERFAMILY Ribonuclease H-like 79 211 IPR012337 -
Lele11g0653 485 FunFam Interferon-stimulated exonuclease gene 20 75 175 - -
Lele11g0653 485 MobiDBLite consensus disorder prediction 44 61 - -
Lele11g0653 485 Gene3D - 332 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0653 Lele-ChrLele11 6281930 6289636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0653 80 219 C2H2 Transcription Factor Family AT3G27970 31.792 5.11e-16 77.8