Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0644 ATGGCACAGTTACCTCCTAAAATACCGAGCATCCCACAAAAGTGGCCTTCTTTTCCTCATCACAAGATGTCAGCTATGGCTAATTTCAATCCTTCTAACACTACTCAACAACAACAATATCATCATCAGCACCAGCAACAAAATTCTTCACCACCATTATCACAACACTTACCTTCCTGGGTCGACGAGTTCCTCGACTTTTCGTCAGCACGCCTTGGTGCTCACCGGCGGTCAGCAAGCGACTCCATCGCGTTCCTCGAGGAATGCCGGAGCTCCGCCACTATCGCGGGAGCCCATGGATTCGACAGGTTGGATGAGGAACAGCTTATGTGGAAGTTCTCCGACGACATTGCCTCCGGTGGATTCCCTCCAGCGTTGTCGAACCCATCCACTCCGTCCGATCAAAATAGCAACAATGATGAGAAACCAATGGTATTAGACGAAGCGGTCCCAGTTAAAGAGAATCAACAGAAGCCGCCACCAAAGAATAGTGAGCAAGGCGAAGTGGAGAGCTCATGCAAAACTGAAACAGTATCACCACCGTCGTTGTCCGTTGCCCCTAGCAGCGTCGAAACCATCGCCGATCCTAAAAGGGTCAAAAGAATATTGGCGAACAGACAATCAGCCCAGAGGTCAAGGGTGAGAAAGCTTCAATACATTTCTGATCTCGAGAAGAGCGTGACGACATTGCAGACGGAGGTATCAGCGTTGTCGCCACGTGTAGCGTTCTTGGACCACCAACGTTTGGTTCTCAACGTCGATAATAGTGCATTGAAGCAACGCATTGCAGCTTTGGCACAAGACAAGATTTTCAAAGATGCACATCAAGAAGCATTAAAGAAGGAAATAGAGAGACTAAGGCAAGTATATGAGCAACAGAAGCTGCAGAAGAGAGGGAACACAGTGAACAACATGAGTGGCAATTCATTGCCCTTTGCTTCTGTTGAGAAGGAGCAGCTCCTCAGTTGA 969 0.483 MAQLPPKIPSIPQKWPSFPHHKMSAMANFNPSNTTQQQQYHHQHQQQNSSPPLSQHLPSWVDEFLDFSSARLGAHRRSASDSIAFLEECRSSATIAGAHGFDRLDEEQLMWKFSDDIASGGFPPALSNPSTPSDQNSNNDEKPMVLDEAVPVKENQQKPPPKNSEQGEVESSCKTETVSPPSLSVAPSSVETIADPKRVKRILANRQSAQRSRVRKLQYISDLEKSVTTLQTEVSALSPRVAFLDHQRLVLNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQVYEQQKLQKRGNTVNNMSGNSLPFASVEKEQLLS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0644 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Lele11g0644 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 258 IPR004827 GO:0003700|GO:0006355
Lele11g0644 322 SUPERFAMILY Leucine zipper domain 197 251 IPR046347 GO:0003700|GO:0006355
Lele11g0644 322 Gene3D - 196 268 - -
Lele11g0644 322 MobiDBLite consensus disorder prediction 124 142 - -
Lele11g0644 322 MobiDBLite consensus disorder prediction 26 56 - -
Lele11g0644 322 MobiDBLite consensus disorder prediction 157 189 - -
Lele11g0644 322 CDD bZIP_plant_RF2 198 248 IPR044759 GO:0003700|GO:0006355
Lele11g0644 322 MobiDBLite consensus disorder prediction 1 57 - -
Lele11g0644 322 Pfam bZIP transcription factor 197 242 IPR004827 GO:0003700|GO:0006355
Lele11g0644 322 Coils Coil 272 296 - -
Lele11g0644 322 MobiDBLite consensus disorder prediction 296 315 - -
Lele11g0644 322 MobiDBLite consensus disorder prediction 296 322 - -
Lele11g0644 322 SMART brlzneu 193 257 IPR004827 GO:0003700|GO:0006355
Lele11g0644 322 FunFam Basic leucine zipper 61 196 269 - -
Lele11g0644 322 PANTHER BASIC LEUCINE ZIPPER 34 1 303 - -
Lele11g0644 322 MobiDBLite consensus disorder prediction 121 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0644 Lele-ChrLele11 6237047 6239021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0644 1 275 bZIP Transcription Factor Family AT3G58120 50.321 1.99e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele11g0644 bZIP_1 2.8e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0644 11 6237047 6239021 Lele11g0644 11 6237047 6239021 ECH
Lele09g0632 09 4833886 4836967 Lele11g0644 11 6237047 6239021 hybridization
Lele10g0580 10 4283174 4285243 Lele11g0644 11 6237047 6239021 hybridization