Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0632 ATGGAGGCTGTGATTACGATCGATGTTCTCCGACGATCGGGAGCTGACGTTACCGTCGCTTCTGCTGGGAAGCAGCTTCGGGTGGAAGCTCTACATGGCGTAAAGATTATTGCTGATGCTCCTGTTTCTGATGTTGCCAGTAGTGCTTTCGAGCTTGTCGCTTTACCTGGTGGTGTTCCAGGTGTGGATAATCTCAGAGACTGTGAAACTTTGGAAAGCTTGTTGAAAAAGCACGTTGCAGATGGACGGCTTTATGCTGCAGTATGCGCTGCTCCTGCCGTGGTACTTGGATCATGGGGTTTGCTCAAGGGACTGAAGGCAACTGGCCATCCATCATTTATGGAAAAACTGGCCTCTCATGCGACTGCTGTGGAATCAATAGTCCATCTGGATGGAAGAGTTGTGACAAGCCGGGCACCAGGCACTACCATGGACTTTGGCGTTGCACTGGTTGAGCAACCTGGAATCCTGGTAGTCTTCGTTGTACATCCCCACAAAGCCGTCATGCGATCCAATCATGGGGATGAATATACTTTTACTGAGCTAAACCCAGTCCAATGGACGTGTGATAATACCCCCAAGATTCTTGTACCAATTGCTAATGGCACTGAGGAAATGGAAGCTGTCATTATCATTGATGTTCTGCGAAGAGCAAAAGCAAATGTTGTAGTTGCTTCTGTTGATGACAAAGTAGAGATTGTAGCTTCTAGGAACGTTAGACTGGAGGCAGACATACTCCTTGATGAAGCAGCTAGCCTTACATATGACCTAATTGTGCTGCCAGGTGGACTTGGGGGTGCCCAAGCTTTTGCAAAGTCCGAAACTCTGGTTAGTTTGCTGAAAAAGCAGAGAGAGTCAAAGAGATATTATGGAGCGATTTGTGCATCCCCTGCATTAGTCTTGGAGCCCCATGGCTTGCTAAAGGGTAAGAAGGCCACTGCCTTTCCTGCCATGTGCAGTAAGTTATCAGATCAGAGCGAAATTGAAAACAGGGTCGTGGTTGACGGCAACCTTATTACCAGCAGAGGACCAGGGACCTCCATGGAGTTTGCATTAACTATCGTGGAAAAGCTATTTGGGCGAAAGTTAGGACTAGAACTTGCAAAAGCGATGGTCTTCACACAACAACGACTAACGATAATCCAAAGGAAGACCAGTAACTTCAAGTCAACATCCCAAACCTGCGATTCCCCTTCTCTCCATCTGTCTTCTCTTTTGCTACTTGGTTTCCAAAAGTTATCGGAGGATTATAGATTAATGTTCGATTATTTACGTCGCAGCACTGGATCGGATCTATTGGAGCCACTGAGTTACTCTGTGATGAGTTGTTTCTCTTGTCTCATCAGAAAAAAGGGATGTGTCTCAGCCACACAACCAACTGAAATTGATCTTGAGGTTTCAGACATTCAGAATGTGAACCTTTACCCCTACAAGGAACTTCGAATTGCCACGGAAGGTTTTAGCCCAGCAAACAAGATAGGGCAAGGCGGTTTCGGATCTGTCTATAAGGGAAGGCTGAGAAATGGGACTCTTGCCGCTATAAAGGTGTTGTCAGCTGACTCGCATCAAGGGGTTCGGGAATTCCTGACCGAAATCAAGGTGATCACTAGCATAGAGCATGAGAACCTAGTTAAGTTGTTCGGATGCTGTGTGGAAGGAAATCACAGGATTTTGGTGTATGGCTATCTTGAAAACAACAGCTTAGCTCAAACACTTATTGGTGGAGGGCATAGTAGCATTCAATTCAGTTGGCCTGTGCGGAGGAACATTTGCATCGGTGTTGCCCGGGGCCTAGCATTCCTTCATGAGGACGTTGAACCACATATTATTCATAGAGACATTAAAGCAAGCAATATACTGCTTGATAGAAACCTGCAGCCCAAAATCTCTGATTTTGGTCTCGCAAAGCTTCTTTCTTCAAACCTGACTCATATTAGTACACGTGTTGCTGGAACAGCTGGTTATCTAGCGCCTGAGTATGCAATACGAAGTCAAGTAACAAGAAAATCAGATGTCTACAGTTTTGGAGTTCTACTATTGGAAATTGTTAGTGGGAGGTGTAATACAAACCGAAGGTTACCTGCTGAAGAACATTATCTTCTTCCAAAGGCATGGACTATGTATGAAAATGGGGAGCTGGAGAAACTGGTGGATGCAACGCTAGAAGACGACCTCAATGTTGAGGAGGCATGCCTGTTTTGTAAGATCGGTCTTCTCTGCACTCAGGATTCTCCCCACCTCCGACCATCAATGTCTTCTGTGCTTGGCATGTTGAAGGGTGAAATTGATGTTGATGATAAGAAAATTACAAAACCAGGATTACTGTTTGAGTTTGTCGAAGGCAAAGAAGAAAAGATGCAAAAAGCTGAGGCTGAAGTGGAAAATACATCTTCCCTGGGCGTCACAGGGAAGCAAGATGATTCCTCTTTGACAGGAACCACTGCCTCTTTTGCTACCATGACCTTCACTTCAATTTATGACCGAAGCGATTAA 2493 0.4541 MEAVITIDVLRRSGADVTVASAGKQLRVEALHGVKIIADAPVSDVASSAFELVALPGGVPGVDNLRDCETLESLLKKHVADGRLYAAVCAAPAVVLGSWGLLKGLKATGHPSFMEKLASHATAVESIVHLDGRVVTSRAPGTTMDFGVALVEQPGILVVFVVHPHKAVMRSNHGDEYTFTELNPVQWTCDNTPKILVPIANGTEEMEAVIIIDVLRRAKANVVVASVDDKVEIVASRNVRLEADILLDEAASLTYDLIVLPGGLGGAQAFAKSETLVSLLKKQRESKRYYGAICASPALVLEPHGLLKGKKATAFPAMCSKLSDQSEIENRVVVDGNLITSRGPGTSMEFALTIVEKLFGRKLGLELAKAMVFTQQRLTIIQRKTSNFKSTSQTCDSPSLHLSSLLLLGFQKLSEDYRLMFDYLRRSTGSDLLEPLSYSVMSCFSCLIRKKGCVSATQPTEIDLEVSDIQNVNLYPYKELRIATEGFSPANKIGQGGFGSVYKGRLRNGTLAAIKVLSADSHQGVREFLTEIKVITSIEHENLVKLFGCCVEGNHRILVYGYLENNSLAQTLIGGGHSSIQFSWPVRRNICIGVARGLAFLHEDVEPHIIHRDIKASNILLDRNLQPKISDFGLAKLLSSNLTHISTRVAGTAGYLAPEYAIRSQVTRKSDVYSFGVLLLEIVSGRCNTNRRLPAEEHYLLPKAWTMYENGELEKLVDATLEDDLNVEEACLFCKIGLLCTQDSPHLRPSMSSVLGMLKGEIDVDDKKITKPGLLFEFVEGKEEKMQKAEAEVENTSSLGVTGKQDDSSLTGTTASFATMTFTSIYDRSD 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0632 830 FunFam Protein DJ-1 homolog C 187 376 - -
Lele11g0632 830 FunFam Protein DJ-1 homolog C 1 154 - -
Lele11g0632 830 Pfam DJ-1/PfpI family 1 153 IPR002818 -
Lele11g0632 830 Pfam DJ-1/PfpI family 194 356 IPR002818 -
Lele11g0632 830 SMART serkin_6 487 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0632 830 TIGRFAM not_thiJ: DJ-1 family protein 1 153 IPR006287 -
Lele11g0632 830 TIGRFAM not_thiJ: DJ-1 family protein 194 368 IPR006287 -
Lele11g0632 830 SUPERFAMILY Protein kinase-like (PK-like) 466 758 IPR011009 -
Lele11g0632 830 FunFam cold-responsive protein kinase 1 458 562 - -
Lele11g0632 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Lele11g0632 830 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 421 792 - -
Lele11g0632 830 Gene3D Transferase(Phosphotransferase) domain 1 563 771 - -
Lele11g0632 830 CDD GATase1_DJ-1 1 153 - -
Lele11g0632 830 FunFam Putative LRR receptor-like serine/threonine-protein kinase 563 770 - -
Lele11g0632 830 Coils Coil 779 799 - -
Lele11g0632 830 CDD GATase1_DJ-1 195 358 - -
Lele11g0632 830 Gene3D Phosphorylase Kinase; domain 1 458 562 - -
Lele11g0632 830 SUPERFAMILY Class I glutamine amidotransferase-like 1 153 IPR029062 -
Lele11g0632 830 ProSiteProfiles Protein kinase domain profile. 487 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0632 830 CDD STKc_IRAK 493 760 - -
Lele11g0632 830 Pfam Protein kinase domain 490 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0632 830 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
Lele11g0632 830 SUPERFAMILY Class I glutamine amidotransferase-like 193 375 IPR029062 -
Lele11g0632 830 Gene3D - 1 169 IPR029062 -
Lele11g0632 830 Gene3D - 188 386 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0632 Lele-ChrLele11 6137644 6145912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0632 460 761 Receptor kinase-like Gene Family AT1G07650 53.922 1.03e-98 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele11g0632 Pkinase 4.2e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0632 11 6137644 6145912 Lele11g0632 11 6137644 6145912 ECH
Lele09g0619 09 4736964 4745453 Lele11g0632 11 6137644 6145912 hybridization
Lele10g0572 10 4194212 4197532 Lele11g0632 11 6137644 6145912 hybridization