Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele11g0630 | ATGCAGGATTTATATGATGACGACTTTGAAGGTTCTAATGATGAAAGACGGATTTTTAATGAGGTATTTTTCAGTAAAGACAGTGTTCAGCCTAGTCGGAGGTGTCTTGTTACTGGAGTGATCAATTTTGAATGTGAATCTAGTAAAAACACAAATATTTCACTCTGCTTTAGCAATGAAAACTCAGTTATAACAAGCCCCTCTTCTTCAAAAGTTACACATTCTGAGGATGATTGTGATGTGATTCAGAATTTGAAAGAGACAGCTCTTGACTATATGCCTGAGAGATTCAATCATGAAGGCTCAAATCATGAGGATGTAAATGTTAAACGCATGAAATTTTCCCTGCATGAACTTCCCTGTAGTAGATCCAATTCCAAAAAGGCTTCTAGTTCACCGACACTTTCAAAAGAATATGTTACTGACATGTCGGGTGCTGTTAGAGGCTTTGATAGTAAACCAGTTTCACTTCTTTTATTTGAATCATCAAAGCATGGTGTAATATCCAGTTGCTATCTGTTGAAGCATAGCATCATGCAGAACAAAAGTAGATCTAAGGATGATGTAGATGTTTTAAATTGTACAAAAACCGCTGGAGATGAAAATTTGGCCAAAGAAGTGGCTACAAGTAAAGTGGCTGCTTCTCCTGTTTCCCAAGAGAGCTTCGCAAACAAGCTTGTAGTAACAAGTCCATCAAGCACTGCTGTTAAGAAATCTGGATCTCATTTCCAATTTGAGGAGACGCCTAAAGGATTTTTATCCCATGACACGGATAAATCAAATTTAACATTGACACCAGACCTTAAGAAGGACCCCCGTGATTTATTGCATTACCGCAGTGTGCAGTTGCTTGTGATGGCAGGATGGTCTATTGAGAAGCGTAAGAGACCTTGTAGGCGCAACTTTGAGTCAGTCTATAGGACACCAGAAGGAAGGCCAGTGCGTGAGTTTATAAAAGCTTGGAGGTTATGTGGTCAGTTTTTGTCTGCTGACAAATACAATTCAATGCAGGATAATTGTAAAGAATGGGCTGACATTGGTCAGTTCTGGTCTGATCTATCCAATGCACTGATAAATGTTGAAAAGGAAATGAACCAGTCAGAGCCTGCTGCTATGTTAGCTTATCAATGGTGTCTCCTGGATCCTTTTGTAGCAGTAATTTTTATTAAAAGAAAGATTGGTGCACTGAAAAAGGGGGAGCTAGTGAAGGTGACACAAAGTATAGTTTCTAGAAATTATAGGATGGCATGTACCGTCAAAAGTTCAGCTTGGGACTGGGAGGGTGCTCCTGCAGCTCCATTTGATATGAAACATGACTCTGCTTTTCTTTTTGATTCTTCTACTGCCACTGGGAGCAAACTCACAACGTCTCTGCTCAACTACCATGCCTGTAATCAGAAAGTTGGGGGTGGAAATAACTTAGGTTATGAACAGACAATTAGTGGGGTAATAAAACTTCCAATATATGAATGTAATAGTTTTGATAACCAGGAAGAGGTGTACTTAGGGCACAATGCTGAGAGCTTGGAAAATCAATGTAGGGAAGTTTCTGTGTATGAAGGGAGCAGTCTTGGCGTAGGCTTATTACCTGATGATGGGTTGGGTTGTACTGGTACACGGTCAAGTGCTTGTACTTCCAATGTTACTACAAATTCTGGAAATTCAAGTCAGTTATTTAGAGGGCTCAAAGTAAACACTTGTCAGGAAAGTGATGTTAGAAATTTTGAAAGCCCTGATGAAAAGTACTTGGAAAATTTGTTGGAAACAAGTAAGAGAGTTGATGGGGATAAGCCAATGGACAAGGCAGAGGAAAAGGATCCATCAGATGGAGAAGTTCAGGATCATTATGGAAGTTATCTGCAGGAATCCCTTAAAAGATACCCACGTGGAGCAAGACGTGGCTTGGTTCATTGTCATGCCTCAGAGGCCTTTCAGCAGTCTGAATATGGTGAGGAAGGGGGTGGAAAAAGCTCAAGAGATTCTGTGCTTGAGACGGACAACACATGTTCTACCCCTGGTGTTTCTCTGAAAAAGATACGGAGGAAGTGTAAAAGGGTATCTGAAATCAAACTGAGTATGTTATATGAAAGTGACATGATGGGTTCTGCAGTTACAGATGAGGTTCAATTACCAAATGGTGAAGCCTGTGGTACTCACTTAGAATTTGAGGAGGGTGAGCATGTATTTGATAATGCAGAGGATAGAGGAGCCCACAGGAAATTATCATCAATCAGTTCGTTCCAGCAACAACATATTGGGAGAAAAAATGCAAAGTTTAGAAAGAGTTGTCACAACTATGACCCTATAACTGAAAAACCTAAGTCTAGTGGATGCCAGATTTCAGATGATGACCTGTTGGTTTCAGCTATTCTTAAGAAAACAGGTTTCATCTCAAAGACAACTCAAGGTGAATCTAAATCTAAATGCTGCAAATCAAGAGCTCAGAGAAAGCTGAAAAGGCAAAAGGGCCATTGCAGGTTGCTACCGAGGAACCTTGGCAATGAAGGGAAGCGCATTAGGGAAGGCAAGAGGTGTTATCTTGGGGCAAGAACAGTGCTATCTTGGTTGATTGAGAATGGGATCATATCTATAAATGATGTGATCCAATACCGAAACCTTAAAGATAATACTGCCATTAAGGATGGTAGGATTACCAGGGATGGTATTATATGTAAGTGTTGCAAAAAGTTGCTGACATTATCTGAGTTCAAGTTTCATGCTGGATATAGATTAAATCGGCCCTGCTTGAACCTTTTCATGGAGTCTGGTGAGCCCTTTACTTTGTGCCTGCTTCAAGCTTGGTCTGCTGAATACAAGGCCAGTAAAAGTGGGAATCAAACTGTGAAAGCTGACGATGAGGATAAAAATGATGACTCATGTGGATTGTGTGGTGATGGCGGTGAGTTGATATGCTGTGATAACTGTCCATCAGCTTTTCATCTTGCTTGTTTGTCTGCTCAGGATATCCCGGAAGGCAACTGGTACTGCACAAACTGCACTTGTCCGATTTGTGAGAATTTTGTCAATGATAAAGAGGCTGCTGGTGCTCGTGATTCATTGCAATGTTTACAGTGTGAGCATAAATATCATGAAAAGTGTCTGAGGGGAGGCAGTAAACCAGAAGGGGAAGTTTCTGATGGTTGGTTTTGTAGTGAACGCTGCCAAGAGGTATACTCCGGCCTTCAATCTTGGGTTGGACTCGTTAATCATATTGATGGTGGCCTCTCATGGATGCTTCTTAGATGCATCCAAGATGACCAAAAGGTTCATTCTGCCCAGTGGTTTGCCCTCAAGGCTCTATGCAATACAAAATTAACTGTTGCCCTTACCATCATGGGGGAGTGCTTTTTGTCAATGGTGGATCCTAGAACAGGCATAGACATGATACCCCATGTTTTATACAATCGGGGGTCTGATTTTGCTCGCCTGAATTTTCAAGGGTTTTACACTGTGGTATTGGAGAAGAAAGATGTCTTGATTTCTGTAGCATCTATCAGGGTGCACGGAACTACAGTTGCAGAGATGCCGCTTATTGCAACTTGCAGTAGGTATCGTCGGCAGGGAATGGGCCGACTTCTTGTGAATGCAATTGAAGAGATGTTAATATCTGTCAAGGTAGCAAAGCTTGTGATAGCAGCCATTCCAGATTTAGTGGAGACCTGGACCAAGGGCTTTGGATTCAAACCTGTAGGTGATGATGAAAAGCAGAAACTGAACAAAATAAACCTGATGGTTTTTCCTGGGACGGTATTACTTGAAAAACCCTTGTTCAAGGAGGATGAAACAGAAGATTACTCGACTAAAGTTGGGGTCTATTGTAAAGGAGCCAAGTCAGACGCGGAACATGATGACAGCAAGAATGGCACAGATTACAGAATCGAATCATTGCAGAAAGATGTTGGAGACACCTCTGCTGATGAAATTGGTATTAAGTCAGACACGGAACATGGTTGCAGCGAGAATGACACAGATTACAGAGCTGAGCCATCATTAGGATTGAAAGAAACAGCAGATTGGAATACCTATTTAAGTGGGGAGAAGATCATGGGCTTTGTAAACAATGTGCAGGAATTGAGAATTAGTAGCCAAATGGAATCCACAAATGAGTCTGTGCAGAAGAACTCTAGTGGGAACTGTTGCACTAACAAAGACGGTACTGAATCAGAAGTAGTAAGAATTATTGAGAACAAGAATATCATCGAAGTGGGTGAAGGTCAGGAGAATGACTTGCGGGGCCCGTTTTTGCAAATGTCCTGCAAGGCACTGGCAGTATTAGGCAACAATTTTGATGTGGATGACATTATTGAATCCTCGGGGATGTATGATGAAACACAGCTTTCTTTGGAACAGAACTCGCAGGAGGCATGTGAAATGATGAATGAAACTCAGAAAGGAATTAGTTAA | 4404 | 0.413 | MQDLYDDDFEGSNDERRIFNEVFFSKDSVQPSRRCLVTGVINFECESSKNTNISLCFSNENSVITSPSSSKVTHSEDDCDVIQNLKETALDYMPERFNHEGSNHEDVNVKRMKFSLHELPCSRSNSKKASSSPTLSKEYVTDMSGAVRGFDSKPVSLLLFESSKHGVISSCYLLKHSIMQNKSRSKDDVDVLNCTKTAGDENLAKEVATSKVAASPVSQESFANKLVVTSPSSTAVKKSGSHFQFEETPKGFLSHDTDKSNLTLTPDLKKDPRDLLHYRSVQLLVMAGWSIEKRKRPCRRNFESVYRTPEGRPVREFIKAWRLCGQFLSADKYNSMQDNCKEWADIGQFWSDLSNALINVEKEMNQSEPAAMLAYQWCLLDPFVAVIFIKRKIGALKKGELVKVTQSIVSRNYRMACTVKSSAWDWEGAPAAPFDMKHDSAFLFDSSTATGSKLTTSLLNYHACNQKVGGGNNLGYEQTISGVIKLPIYECNSFDNQEEVYLGHNAESLENQCREVSVYEGSSLGVGLLPDDGLGCTGTRSSACTSNVTTNSGNSSQLFRGLKVNTCQESDVRNFESPDEKYLENLLETSKRVDGDKPMDKAEEKDPSDGEVQDHYGSYLQESLKRYPRGARRGLVHCHASEAFQQSEYGEEGGGKSSRDSVLETDNTCSTPGVSLKKIRRKCKRVSEIKLSMLYESDMMGSAVTDEVQLPNGEACGTHLEFEEGEHVFDNAEDRGAHRKLSSISSFQQQHIGRKNAKFRKSCHNYDPITEKPKSSGCQISDDDLLVSAILKKTGFISKTTQGESKSKCCKSRAQRKLKRQKGHCRLLPRNLGNEGKRIREGKRCYLGARTVLSWLIENGIISINDVIQYRNLKDNTAIKDGRITRDGIICKCCKKLLTLSEFKFHAGYRLNRPCLNLFMESGEPFTLCLLQAWSAEYKASKSGNQTVKADDEDKNDDSCGLCGDGGELICCDNCPSAFHLACLSAQDIPEGNWYCTNCTCPICENFVNDKEAAGARDSLQCLQCEHKYHEKCLRGGSKPEGEVSDGWFCSERCQEVYSGLQSWVGLVNHIDGGLSWMLLRCIQDDQKVHSAQWFALKALCNTKLTVALTIMGECFLSMVDPRTGIDMIPHVLYNRGSDFARLNFQGFYTVVLEKKDVLISVASIRVHGTTVAEMPLIATCSRYRRQGMGRLLVNAIEEMLISVKVAKLVIAAIPDLVETWTKGFGFKPVGDDEKQKLNKINLMVFPGTVLLEKPLFKEDETEDYSTKVGVYCKGAKSDAEHDDSKNGTDYRIESLQKDVGDTSADEIGIKSDTEHGCSENDTDYRAEPSLGLKETADWNTYLSGEKIMGFVNNVQELRISSQMESTNESVQKNSSGNCCTNKDGTESEVVRIIENKNIIEVGEGQENDLRGPFLQMSCKALAVLGNNFDVDDIIESSGMYDETQLSLEQNSQEACEMMNETQKGIS | 1467 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele11g0630 | 1467 | CDD | NAT_SF | 1151 | 1211 | - | - | |
Lele11g0630 | 1467 | Gene3D | - | 1134 | 1244 | - | - | |
Lele11g0630 | 1467 | MobiDBLite | consensus disorder prediction | 646 | 666 | - | - | |
Lele11g0630 | 1467 | CDD | PHD_SF | 1000 | 1052 | - | - | |
Lele11g0630 | 1467 | SUPERFAMILY | FYVE/PHD zinc finger | 950 | 1000 | IPR011011 | - | |
Lele11g0630 | 1467 | Pfam | Tify domain binding domain | 882 | 932 | IPR032308 | - | |
Lele11g0630 | 1467 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 944 | 1019 | IPR013083 | - | |
Lele11g0630 | 1467 | PANTHER | PHD FINGER FAMILY PROTEIN | 3 | 1380 | - | - | |
Lele11g0630 | 1467 | SMART | PHD_3 | 959 | 1000 | IPR001965 | - | |
Lele11g0630 | 1467 | SMART | PHD_3 | 1001 | 1055 | IPR001965 | - | |
Lele11g0630 | 1467 | ProSiteProfiles | Zinc finger PHD-type profile. | 957 | 1002 | IPR019787 | - | |
Lele11g0630 | 1467 | CDD | PHD1_AIRE | 960 | 999 | - | - | |
Lele11g0630 | 1467 | Pfam | PHD-finger | 960 | 1001 | IPR019787 | - | |
Lele11g0630 | 1467 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 1141 | 1233 | IPR016181 | - | |
Lele11g0630 | 1467 | MobiDBLite | consensus disorder prediction | 588 | 614 | - | - | |
Lele11g0630 | 1467 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 1118 | 1257 | IPR000182 | GO:0016747 | |
Lele11g0630 | 1467 | MobiDBLite | consensus disorder prediction | 588 | 612 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele11g0630 | Lele-ChrLele11 | 6122214 | 6129564 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele11g0630 | 1 | 407 | PHD Transcription Factor Family | AT3G14980 | 34.230 | 1.98e-47 | 184 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Lele11g0630 | TDBD | 2.5e-15 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele09g0618 | 09 | 4722019 | 4730010 | Lele11g0630 | 11 | 6122214 | 6129564 | hybridization | |
Lele10g0571 | 10 | 4181863 | 4188473 | Lele11g0630 | 11 | 6122214 | 6129564 | hybridization |