Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0609 ATGAGACCCTTTTTGCTTACGCTTTGCTTCTCTACCTTCTTTTGTGTTGTTGTTTCTGCTCTGAGCCCTGATGGGGTTTCTCTGCTTTCTCTCTCAAAGCATTGGACGTTTGTGCCTCCTTCCATAAGCTCAAGCTGGAACATCTCTGACTCAACTCCGTGCTCATGGGTAGGAATCCAGTGTGACAATGCCCACAATGTCATCTCCATCAACCTCAATTCTTTTTCTATTGTTGGTCATTTAGGACCTGAAATAGCACAGTTGAGTCATTTGCTAACTCTTGTTTTATACTCTAACAGTCTCTCAGGAAAAATTCCCTCTCAGATAGGTAATTGTAGTAAGCTTGTTTATTTGGACCTTTCTGAAAACAACTTTACAGGGAAAATACCAAAGAGATTTAGCAACTGTAGTATCCTTGAGCACTTGGATCTTTCTGAAAATTCACTTAGTGGGGAAATTCCAAATAGCTTTAGAAACTTGCAAAATTTGCAATATTTCAATCTTCATTCCAATCTCATTTCAAGTGGTGGAATTCCTGAATACTTGTTTGATTTTCCCCAGTTAGACACTATGTTTTTGGAAATGAACAACCTAAGTGGTCCTATTCCTATGAATATTGGCAATAGCACCAAACTTCGGAGGTTGTATTTGCAAAATAATCTCTTGTCTGGGATGATACCCTCTTCCATTGGAAACTGCAGCAAATTAGAGGAAGTGTTTCTTGGTAAGAACAGATTACAGGGAAATTTACCTCAAAGTCTTAACAATCTTCATAATCTTGTTTATTTTGATGTCAGCTTTAATAATCTTAAAGGTCCAATTCCATTAGGTTCTTCTGGCAATTGTAAGAGTCTAGATTCTTTTGATTTGTCACACAATGTATTTAGTGGGGGTATTCCTACTGGATTAAGGAATTGTACTAGCTTGACACAAGTTTTTGCTTCCAATAGCAACTTAACAGGCAGCATACCATCTTTCTTTGGCCTACTAAGGAATCTTTCTGTTCTTCACCTTTCTCAGAACCATTTGTCTGGACAGATACCTTCAGAAATAGGTCGTTGCAATTCTATGAAGGAGTTGATTTTAGATACCAATCAACTTGAAGGAGAAATTCCTAGTGAGTTAGGGATGCTAACTGAATTGCAGGATTTGCATTTGTTTTACAATAAGCTCACAGGTGAAATCCCAATTATCCTATGGAAAATTCCAAGTCTTGTGAATATCTTTTTGTACAACAATAGCTTTCATGGGGAGCTACCTTTAGAAGTCACCAAACTTAATCAGCTACAGAAAATCTCACTGGCTGACAACAATTTCTCTGGAACTATACCTCAAAGCTTAGGAATTAATAGTAGTTTGGTGTGGTTGGACTTGACAAATAACAGTTTTACCGGTCATCTCCCCCCGAATCTTTGTTTTGGAAAGAAATTAGAGAGGCTAGTTGTGGGTGTTAATCAACTGCAAGGTAACATACCTTCTGATATAGGAGCTTGTACAACTCTCACAAGGTTGATTCTCAAATCAAATAACTTCATGGGACCTTTTCCTAATTTGGAAAATAATATGAATCTTGAATACATGGACATCAGTGACATTAACATCAGTGGAGCAATTCCATCAAGTTTAGGGAATTGCAAAAACCTCACTGATATTAATTTGTCCATGAACAAACTTTCAGGGTTTATACCCTCAGAGCTAGGAAAACTTGCAAATCTTAGGAAGTTGAATCTTTCTGGCAACAATTTGCATGGCCCTTTGCCTCCTCTTTTATCAAACTGTATCAAAATAGAATACTTTGATGTAGGATTCAATCACATAAATGGTTCATTTCCTTCAAGTTTCAGCAAATGGACTGGGCTATCAACGTTGATCTTAAGAGAGAATCATTTTACTGGAGGCATCCCAACATTCTTAACAGAATTTGAAATGCTTTCTGAGCTACAACTCGGGGGCAATGCATTTGGAGGCGAAATTCCCAGCTTTATTGGATCATTACGGAATCTGCTTTATGGGTTGAATTTAAGTGCCAATGGATTGGTAGGTGAAGTTCCATTAGAGATTCGGAAACTGAATATGCTTCTGAGACTAGATTTATCTCTTAACAATCTGTCTGGAAGCATAGAAGTTCTTGAACAGCTCTCTTCATTAGTTGAAATCAATATCTCATTCAATTCATTTACTGGTCCTGTACCAAATGCACTGATGAAGCTGATGAGTTCTCATCCATCATCGTTCTCGGGAAATCCTGGTTTATGTGTTAATTGTTTGCCCTTAGATAGCTCAAATTGCCCCAAGGATGTCAGTTTGAAGACTTGCGGCTCCATGTCAAGTCATCATAAAGGACAGAGTAAAATTAAAATCGCAGTGATATCACTTGGATCCTCTATTTTTTTTATTCTTCTGTTGTTAGGACTAGCTTTTATGCTTCTCCTTTGCATAAGATTGAGGAAGGATATCAGAACATTTGCTAATCAAGGTTCATCTTCCTTTCTCAAGAAAGTCATGGAGGCAACAGAGAACCTAAATGATCAGTATATAATTGGCAGAGGAGCTCATGGAGTTGTCTATAAGGTTTCACTGGATCCAAACAAAGTTTTTGCTGTGAAGAAACTTCCCTTTGTCGACAATGAAGGACAAAGCAAAAGCATGAAGAGAGAAATTGATATTGTTGGTAAGATTAGGCATCGAAATCTGATCAGATTGAAGAACTTCTGGTTCATAAAGGATTATGGCTTGATCTTGTACACCTTCATGGAAAATGGAAGCTTGCATGATGTTTTGCATGAAATGAATCCACCACTATCCTTGGATTGGAGTGTTCGCTATAAGATAGCTCTTGGAATTGCTCATGGACTTGCATACCTCCATTTTGATTGTGATCCAGTCATAGTACACCGAGACATCAAACCACAAAATGTTCTTTTAGATTCTGACATGGAGCCTCATATTGCTGATTTTGGTATTGCCAAGGTTTTGGATCAAATCACTGCTTCAACAACTTCTATAGCTGTTCCTGGCACTGTGGGGTATATTGCACCAGAGAATGCATTTTCAACTATAGTGAGCAGGAAATCTGATGTATATAGTTATGGAGTAGTTTTGCTTGAGATATTAACCAGAAAGAAGGTGCTAGATGCTTCATTCATGGAGGGAACAGATATAGTGGGATGGGTTAAATCTGCATGGGAAGAATCAAGAGAAATAGATGGGATTGTTGATCCAAGCCTTGGTGATGAACTTTGGGATTCAAATGTAAGGGAACAAGTTGAACAAGTGCTTTTGGTTGCACTGAGATGTACTGAGAAGGATCCAAGTATGAGACCAACAATGAGAGAAGTCATCAGCCAATTGATTATTAGAAGCAAAGCTTGTGGTGACACGAAGTAA 3387 0.3803 MRPFLLTLCFSTFFCVVVSALSPDGVSLLSLSKHWTFVPPSISSSWNISDSTPCSWVGIQCDNAHNVISINLNSFSIVGHLGPEIAQLSHLLTLVLYSNSLSGKIPSQIGNCSKLVYLDLSENNFTGKIPKRFSNCSILEHLDLSENSLSGEIPNSFRNLQNLQYFNLHSNLISSGGIPEYLFDFPQLDTMFLEMNNLSGPIPMNIGNSTKLRRLYLQNNLLSGMIPSSIGNCSKLEEVFLGKNRLQGNLPQSLNNLHNLVYFDVSFNNLKGPIPLGSSGNCKSLDSFDLSHNVFSGGIPTGLRNCTSLTQVFASNSNLTGSIPSFFGLLRNLSVLHLSQNHLSGQIPSEIGRCNSMKELILDTNQLEGEIPSELGMLTELQDLHLFYNKLTGEIPIILWKIPSLVNIFLYNNSFHGELPLEVTKLNQLQKISLADNNFSGTIPQSLGINSSLVWLDLTNNSFTGHLPPNLCFGKKLERLVVGVNQLQGNIPSDIGACTTLTRLILKSNNFMGPFPNLENNMNLEYMDISDINISGAIPSSLGNCKNLTDINLSMNKLSGFIPSELGKLANLRKLNLSGNNLHGPLPPLLSNCIKIEYFDVGFNHINGSFPSSFSKWTGLSTLILRENHFTGGIPTFLTEFEMLSELQLGGNAFGGEIPSFIGSLRNLLYGLNLSANGLVGEVPLEIRKLNMLLRLDLSLNNLSGSIEVLEQLSSLVEINISFNSFTGPVPNALMKLMSSHPSSFSGNPGLCVNCLPLDSSNCPKDVSLKTCGSMSSHHKGQSKIKIAVISLGSSIFFILLLLGLAFMLLLCIRLRKDIRTFANQGSSSFLKKVMEATENLNDQYIIGRGAHGVVYKVSLDPNKVFAVKKLPFVDNEGQSKSMKREIDIVGKIRHRNLIRLKNFWFIKDYGLILYTFMENGSLHDVLHEMNPPLSLDWSVRYKIALGIAHGLAYLHFDCDPVIVHRDIKPQNVLLDSDMEPHIADFGIAKVLDQITASTTSIAVPGTVGYIAPENAFSTIVSRKSDVYSYGVVLLEILTRKKVLDASFMEGTDIVGWVKSAWEESREIDGIVDPSLGDELWDSNVREQVEQVLLVALRCTEKDPSMRPTMREVISQLIIRSKACGDTK 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0609 1128 SUPERFAMILY RNI-like 178 488 - -
Lele11g0609 1128 Gene3D Phosphorylase Kinase; domain 1 813 917 - -
Lele11g0609 1128 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 379 1117 - -
Lele11g0609 1128 Gene3D Ribonuclease Inhibitor 24 177 IPR032675 -
Lele11g0609 1128 Gene3D Ribonuclease Inhibitor 452 522 IPR032675 -
Lele11g0609 1128 SUPERFAMILY L domain-like 62 203 - -
Lele11g0609 1128 SUPERFAMILY RNI-like 404 748 - -
Lele11g0609 1128 SMART serkin_6 841 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0609 1128 SMART LRR_typ_2 257 281 IPR003591 -
Lele11g0609 1128 SMART LRR_typ_2 330 354 IPR003591 -
Lele11g0609 1128 SMART LRR_typ_2 451 474 IPR003591 -
Lele11g0609 1128 SMART LRR_typ_2 88 112 IPR003591 -
Lele11g0609 1128 SMART LRR_typ_2 160 185 IPR003591 -
Lele11g0609 1128 SMART LRR_typ_2 569 593 IPR003591 -
Lele11g0609 1128 SMART LRR_typ_2 210 233 IPR003591 -
Lele11g0609 1128 SMART LRR_typ_2 426 450 IPR003591 -
Lele11g0609 1128 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 475 761 - -
Lele11g0609 1128 ProSiteProfiles Leucine-rich repeat profile. 571 593 IPR001611 GO:0005515
Lele11g0609 1128 FunFam Leucine-rich repeat receptor-like protein kinase 23 179 - -
Lele11g0609 1128 Gene3D Ribonuclease Inhibitor 178 374 IPR032675 -
Lele11g0609 1128 FunFam Serine/threonine-protein kinase-like protein CCR4 918 1128 - -
Lele11g0609 1128 Pfam Protein kinase domain 845 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0609 1128 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Lele11g0609 1128 ProSitePatterns Protein kinases ATP-binding region signature. 847 870 IPR017441 GO:0005524
Lele11g0609 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 276 370 - -
Lele11g0609 1128 Gene3D Transferase(Phosphotransferase) domain 1 918 1124 - -
Lele11g0609 1128 Pfam Leucine rich repeat 211 270 IPR001611 GO:0005515
Lele11g0609 1128 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Lele11g0609 1128 Pfam Leucine rich repeat 523 582 IPR001611 GO:0005515
Lele11g0609 1128 Gene3D Ribonuclease Inhibitor 523 637 IPR032675 -
Lele11g0609 1128 Gene3D Ribonuclease Inhibitor 638 763 IPR032675 -
Lele11g0609 1128 PRINTS Leucine-rich repeat signature 139 152 - -
Lele11g0609 1128 PRINTS Leucine-rich repeat signature 569 582 - -
Lele11g0609 1128 SUPERFAMILY Protein kinase-like (PK-like) 829 1119 IPR011009 -
Lele11g0609 1128 ProSiteProfiles Protein kinase domain profile. 841 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0609 1128 Gene3D Ribonuclease Inhibitor 375 451 IPR032675 -
Lele11g0609 1128 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 812 917 - -
Lele11g0609 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 274 - -
Lele11g0609 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 963 975 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0609 Lele-ChrLele11 5967624 5971611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0609 16 1117 Receptor kinase-like Gene Family AT1G73080 50.045 0.0 1025
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele11g0609 Pkinase 5.1e-44 CL0016