Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0608 ATGACGTCTGGGACGAGGCAACCAACTTGGAAGGAGAGGGAGAACAATAAGAGGAGAGAGAGGAGGCGAAGAGCCATAGCCGCGAAGATTTTCGCTGGTCTCAGAACGTATGGCAACTACAAGCTCCCTAAGCACTGCGACAACAATGAGGTGCTCAAGGCTCTCTGCAACGAGGCTGGCTGGACTGTTGAACCCGACGGCACCACTTACCGCAAGGGATGTAAGCCTGTAGAACGTATGGATGTGGTTGGTGGTTCTGCAGCAGCAAGCCCATGTTCATCTTACCATCCAAGTCCCTGTGCTTCCTACAACCCAAGCCCTGGTTCTTCTTCCTTCCCAAGCCCACGTTCATCGGCCTATGCAGCAAATCCTAATGGTGATGGCAATTCCCTAATTCCATGGCTAAAAAATCTCTCGTCTGGATCATCTTCAGCATCCTCTTCAAAGCTCCCCCATCTCTACATTCATACTGGCTCCATCAGTGCTCCTGTCACTCCTCCACTGAGCTCTCCAACTGCCCGAACACCCCGAACCAAAGGCGACTGGGATGATCAGTCCATTCGTCCTGGGTGGGTTGGGCAGCAGTATTCCTTCCTGCCCTCCTCAACTCCTCCAAGCCCCGGTCGTGAGGTTGTTAACCCAGAATGGTTTGCTGGTATTAGGGTTCCCCAGGGTGGGCCTAACTCTCCCACCTTTAGCTTGGTCTCTTCGAACCCCTTTGGCTTCAGAGAAGAGGTTCTAGCTGGCAGTGGTTCGCGAATGTGGACTCCGGGGCAAAGTGGGACATGTTCTCCAGCCATAGCAGCTGGCTCTGATCACACCGCTGACATTCCCATGGCTGAAGTGGTTTCAGAAGAATTTGCCTTTGGGAGTAACATAGCGGGCTTGGTTAAACCATGGCAAGGAGAGAGGATCCATGAAGATAGCGGATCAGATGACCTTGAACTCACTCTTGGGAGCTCAAAAACCAGGTGA 975 0.5272 MTSGTRQPTWKERENNKRRERRRRAIAAKIFAGLRTYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPVERMDVVGGSAAASPCSSYHPSPCASYNPSPGSSSFPSPRSSAYAANPNGDGNSLIPWLKNLSSGSSSASSSKLPHLYIHTGSISAPVTPPLSSPTARTPRTKGDWDDQSIRPGWVGQQYSFLPSSTPPSPGREVVNPEWFAGIRVPQGGPNSPTFSLVSSNPFGFREEVLAGSGSRMWTPGQSGTCSPAIAAGSDHTADIPMAEVVSEEFAFGSNIAGLVKPWQGERIHEDSGSDDLELTLGSSKTR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0608 324 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Lele11g0608 324 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 324 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lele11g0608 324 MobiDBLite consensus disorder prediction 304 324 - -
Lele11g0608 324 MobiDBLite consensus disorder prediction 162 176 - -
Lele11g0608 324 MobiDBLite consensus disorder prediction 1 22 - -
Lele11g0608 324 MobiDBLite consensus disorder prediction 91 124 - -
Lele11g0608 324 MobiDBLite consensus disorder prediction 86 124 - -
Lele11g0608 324 MobiDBLite consensus disorder prediction 161 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0608 Lele-ChrLele11 5959836 5963769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0608 1 324 BZR Transcription Factor Family AT1G78700 71.557 6.63e-139 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele11g0608 BES1_N 1.1e-66 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0608 11 5959836 5963769 Lele12g0728 12 15410568 15414132 ECH
Lele11g0608 11 5959836 5963769 Lele11g0608 11 5959836 5963769 ECH
Lele09g0598 09 4567958 4572364 Lele11g0608 11 5959836 5963769 hybridization
Lele10g0546 10 4006906 4010645 Lele11g0608 11 5959836 5963769 hybridization