Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0604 ATGTCAAGCTCCAAACTTATCTCTGTTTTCTTCTTCGGATTTCTGCTTCTCTATTTCTTCACCGTTTCTCCTTCAAACGCTCAACTTATACCCCAGGACGAAGTGAAGGTTCTACAGGCAATTGCTGATAAACTCACAAATGTGAATTGGAAGGTGACACAAACATCTTGTAGAACTGGGGATGGATTCAATATCCTCACTGTATCTTCTGAAGTAACGAGGAATGTCACTTGCAATTGCACTTTCCAAAACGACGCCGTGTGCCATGTCACTCGCATTCTGTTGAAAAGCCAGAATATAACAGGAGAAATACCCAGCGAATTTGGGAATCTTACACAACTGATTCAACTCGATCTCTCTCGCAACTATCTCAATGGCACAATTCCAACAGTTTTTACACGCATCCCTCTTGTCAATCTGTCACTTTTGGGGAATCGCATTAGTGGTCCGATTCCCGCAGAATTGGGTGAAATTGCTACTTTGCAGGAGCTGGTTTTAGAAAATAATCAGCTTGAAGGACCCCTTCCTAAGAGTCTTGGAAATTTGAGCAACCTACGGAGATTACTTCTTTCTGCAAATAATTTTACCGGGACAATACCAGAAACGTTTGGAAATCTAAAGAACCTAACTGATTTTAGGATAGATGGAAGCAGTTTGTCAGGGAAGATACCTAGTTTTATTGGGAACTGGACCAAAATAGATGTTCTGAATATGCAGGGCACAGGCATGGAAGGTCCAATTCCTCCCACCATATCCTTGCTTACAAATTTGACAGAATTGAGAATATCAGATTTGAGTGGAACAACAACCGTGACATTTCCTGATCTCAAAGATTTGAAGATTTTGGAACGATTGATATTGAGAAATTGCCTAATTGTTGGTTCCATTCCAAATAACTTCGACCAAATGACAACGTTAAAGACTATAGACCTGAGCTTTAACAGGCTGACCGGTTCAATCCCTGCTTCATTTGAGGACTTGGACTTTAATTACTTGTTTCTGACGAACAATTCTCTGAGTGAACCAATTCCACAGTGGATGACAGTGAACAAAGAACATATTGATTTATCGTACAACAATTTTACTGAGACTTCTGCATCTACTTGCCAGCTGTCGAATGTGAACTTGGCTTCTAGTCTATCATCTTCTGCAACCAATTCACTTGTGTGTTTGAAGAAGGGCCTACCTTGTGAGAGAAAACCAACATATTATTCGTTGTTCATAAACTGTGGAGGAAAAATGATGGAGTTCGATGGTCATGAATATGAAGAAGATTTATCTCAAAATGGCATTTCATACTTTAATCTTCAAAACAACTGGGCTTATAGCAGCACAGGTGTATATATGGGTGATGATGAAGCTGCTTTTGTAGCAACAAGTTCATCTTCGTGGAATGTCAGTAACCCAGAATACTACCAAACTGCGCGGCTTAGCCCTCTATCCCTCAAGTACTATGGCCTATGTATGATGGAGGGCAATTATAAAGTAAAACTTCATTTTGCTGAGATAATGTTTTCTGATGACCAGACATTTAGCAGCATTGGTAGACGCGTATTTGACGTTTCCATTCAAGGTGTTAAATACCTGAAAGATTTTAACATTGCGGAGAAAGCAGGTGGAGTTGGTAAGGGCATCACTGAGGAATATGATGTTTATGTGAATGATAGCACCTTGGAGATCCATCTATATTGGGCGGGGAAAGGAACTACTGCGATTCCCAGTAGAGGTGTATATGGACCTCTAATATCTGCTATCACCGTGACCCCGAACTTCAAAATTCCCTCAAAAGGATTGACCACTGGAGCTATTGTTGGAATTGTGGTTGGATCATGTGTTTTCCTTGTATTGGTACTCGTTGTCCTCCGAAAGAAGGGTTTCCTTGGTGGGAAAGATCCACAAGAAAGAGAACTCTTAGATCTTAAGACAGGTTATTTTTCTGTAAGACAAATTAAAACAGCCACCAATAACTTTGACCCAACAAATAAGATCGGAGAGGGAGGATTTGGGCCTGTGTTCAAGGGTGTGCTGTCAGATGGTGTAGTCATTGCTGTTAAGCAGCTCTCTTCCAAATCAAAGCAAGGGAATCGCGAATTTGTCAACGAGATAGGAATGATCTCTGCATTGCAGCATCCGAATCTTGTGAAGCTTTATGGCTGTTGCATTGATGGAAATCAACTAATGCTTATATATGAATACATGGAGAACAATAGTCTTGCTAGAGCACTTTTTGGCCGCGAAGAACAGAGGATACACTTGGATTGGCCCAGAAGATTGAAGATTTGTCAGGGGATAGCAAGGGGTTTAGCTTATCTTCACGAGGAGTCAAGATTGAAAATAGTACACAGGGACATTAAGGCAACAAACATCTTACTTGATAAGGATCTGAATGCCAAAATTTCTGACTTTGGTCTAGCGAAGCTTGATGAAGAAGAGAATACACATATCAGCACCCGAATAGCTGGAACAATTGGTTATATGGCCCCTGAATATGCAATGAGAGGTTATTTGACAGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTGGAGATTGTTAGTGGAAAGAGCAACACCAATTACCGGCCAAAGGATGAGTTCGTTTATCTTCTTGATTGGGCTTATGTCCTCCAAGAGCAAGGAAATCTTCTGGAACTGGTTGATCCGTATCTTGGTTCAAGCTACTCCCAAGATGAGGCCATGAGAATGCTCAACTTGGCTCTTTTGTGCACCAACCCATCTCCCACTCTCAGACCAGCCATGTCATCTGTAGTGAGCATGCTTGAAGGAAATATTCCAATTCAAGCTCCAATAATCAAGCGCAAAGATGCAAACCAGGATGCGAGGTTCAAAGCCTTTGAGATGCTATCACATGACAGCCAAACGTCTATAGCCTCTCAAACAAGCATGGAACAAACAGGCAAGTCAATGGATGGGCCATGGATTGATTCCTCTATATCTCTTCCAAGTGGAGACGATCATTCTTCATCTAGGAGGCTTCTTTGA 3006 0.4125 MSSSKLISVFFFGFLLLYFFTVSPSNAQLIPQDEVKVLQAIADKLTNVNWKVTQTSCRTGDGFNILTVSSEVTRNVTCNCTFQNDAVCHVTRILLKSQNITGEIPSEFGNLTQLIQLDLSRNYLNGTIPTVFTRIPLVNLSLLGNRISGPIPAELGEIATLQELVLENNQLEGPLPKSLGNLSNLRRLLLSANNFTGTIPETFGNLKNLTDFRIDGSSLSGKIPSFIGNWTKIDVLNMQGTGMEGPIPPTISLLTNLTELRISDLSGTTTVTFPDLKDLKILERLILRNCLIVGSIPNNFDQMTTLKTIDLSFNRLTGSIPASFEDLDFNYLFLTNNSLSEPIPQWMTVNKEHIDLSYNNFTETSASTCQLSNVNLASSLSSSATNSLVCLKKGLPCERKPTYYSLFINCGGKMMEFDGHEYEEDLSQNGISYFNLQNNWAYSSTGVYMGDDEAAFVATSSSSWNVSNPEYYQTARLSPLSLKYYGLCMMEGNYKVKLHFAEIMFSDDQTFSSIGRRVFDVSIQGVKYLKDFNIAEKAGGVGKGITEEYDVYVNDSTLEIHLYWAGKGTTAIPSRGVYGPLISAITVTPNFKIPSKGLTTGAIVGIVVGSCVFLVLVLVVLRKKGFLGGKDPQERELLDLKTGYFSVRQIKTATNNFDPTNKIGEGGFGPVFKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIDGNQLMLIYEYMENNSLARALFGREEQRIHLDWPRRLKICQGIARGLAYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKDEFVYLLDWAYVLQEQGNLLELVDPYLGSSYSQDEAMRMLNLALLCTNPSPTLRPAMSSVVSMLEGNIPIQAPIIKRKDANQDARFKAFEMLSHDSQTSIASQTSMEQTGKSMDGPWIDSSISLPSGDDHSSSRRLL 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0604 1001 Gene3D Ribonuclease Inhibitor 269 385 IPR032675 -
Lele11g0604 1001 Gene3D Ribonuclease Inhibitor 164 268 IPR032675 -
Lele11g0604 1001 Pfam Malectin domain 405 585 IPR021720 -
Lele11g0604 1001 Gene3D Phosphorylase Kinase; domain 1 628 732 - -
Lele11g0604 1001 FunFam Putative LRR receptor-like serine/threonine-protein kinase 733 940 - -
Lele11g0604 1001 MobiDBLite consensus disorder prediction 961 1001 - -
Lele11g0604 1001 SUPERFAMILY L domain-like 63 386 - -
Lele11g0604 1001 MobiDBLite consensus disorder prediction 961 980 - -
Lele11g0604 1001 Gene3D Ribonuclease Inhibitor 35 160 IPR032675 -
Lele11g0604 1001 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 34 198 - -
Lele11g0604 1001 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 965 - -
Lele11g0604 1001 SMART serkin_6 657 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0604 1001 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 199 266 - -
Lele11g0604 1001 ProSiteProfiles Protein kinase domain profile. 657 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0604 1001 Gene3D - 403 590 - -
Lele11g0604 1001 Pfam Leucine Rich Repeat 306 326 IPR001611 GO:0005515
Lele11g0604 1001 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 732 - -
Lele11g0604 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Lele11g0604 1001 CDD STKc_IRAK 663 930 - -
Lele11g0604 1001 Gene3D Transferase(Phosphotransferase) domain 1 733 938 - -
Lele11g0604 1001 SUPERFAMILY Protein kinase-like (PK-like) 642 942 IPR011009 -
Lele11g0604 1001 Pfam Protein tyrosine and serine/threonine kinase 661 926 IPR001245 GO:0004672|GO:0006468
Lele11g0604 1001 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0604 Lele-ChrLele11 5933088 5941474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0604 10 992 Receptor kinase-like Gene Family AT1G53440 62.326 0.0 1237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele11g0604 PK_Tyr_Ser-Thr 4e-50 CL0016