Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0603 ATGAAGTACAACTACGAGAGTTGTCCTCAATATTATTGCCTTCTCGTGCTCCTTCTCTTTTGCTTCTTCTCCACTTTTGCCCTCGGAGTCACTTCACCAGATGAAGCTGAGAAACTGGGAAAGAACGATTGGGAGTTGAAATTAGATCCATGTACTAACTGGACTAGAAATGATGAAGATATCGTCTTCAGTTGTTCTCTTGGTGGTGATGGTTTTGATCATGTTACCGTCATTTCGGTCTTTGGAAATCGGCTGACTGGTACGATCCCGCGAGAGCTAGGAAACATTTCCAATCTCACGAGTTTGGACTTGGAGTTCAATCAATTTTCTGGAAATCTTCCTCCGGAGCTTGGGAATCTCATCAAGATTGAAAGATTTGGAATTGGGGACAATCAATTTTCTGGGAAGATACCTGATTTTATTCAGGACTGGACAAGTCTCATGAGCATGAGGATTTATGGGAGTGGTTTAAGTGGGCCAATTCCTTCAGTATTCTCACTCATGGAAAATCTAACTGAGTTGATAATTACTGACCTGAATGGATCTGAATATTCTCCTTTGCCAGAACTTGATTATAACTTGACAAAGTTGGAAACACTGATATTGAGAAATTGCAATATTAATGGAACAATACCAGGATATCTTGGGAATATGACTGCTTTAAAATACATATTTTTGACAAGAAACCTTCTCACTGGACCAATACCTACATGGATAGATAATGTGGCGTCCACCATGGACATGAACCTCTTTGCAAGCTCGTCAATGGGCAACAACTCGGGAATGCCCGTGTGTGGAACGAGGGTGCGAGAGAACTTAAACATTGCTGAAGAAGCAGAAGGAGTAGGGAAGGCGGTAATAAAATCATTCACTGCTGAGGTCACTGATAGTACCTTGGAGATTAGATTCTATTGGGCTGGAAAAGGGACAACTGCTATCCCTTATAAATCAGTATACGGTCCTCTTATATCTGCCATCTCTGTGGAATCCGACTTTCCAGATGGATTATCTACGGGAGCTGTGATAGGAATCGTTGTTGCAGGAGCTGTTATTGTGATCTTGGCATTTTGTATACTTTGGTGGAGAGGTTGTATAGGAAACAGAAGTTCATTGGCTAAAGATCTTGAAGGTTTGGATCTTAGAACTGGTATATTCACCTTCAAGGAAATCAAAGTAGCAACCAACAACTTTAATATAGCTAATAAGATCGGAGAAGGAGGGTTTGGTCCTGTTTTTAAGGGTAAGCTCCCAAATGGCACAATAATTGCAGTTAAGCAGCTCTCTACCAAATCAAAGCAAGGGAATCGTGAATTTATAAATGAAATAGGCATGATTTCAGCTTTGCAGCACCCCCATCTAGTTAAGCTTTATGGGTGTTGTGTTGAAGGAGATCAATTGTTGTTAATATATGAGTTCATGGAGAACAATAGTCTTGCTCGAGCCTTATTTGGTTCAGAAGAATTCCGATTAAAATTAGATTGGCCGATAAGACACAAGATTTGTGTTGGGATTGCTAGAGGTTTGGCATACCTCCATGAAGAATCAAGGTTGAAGATTGTTCATAGAGACATCAAGGCCACTAATGTGCTACTAGATAAAAATCTCAACCCCAAGATATCAGATTTTGGTTTGGCCAAGCTTGTTGAAGAGGATAATACACACATAAGCACTCGAATTGCTGGAACTTATGGATATATGGCACCTGAATATGCAATGCATGGTTATTTAACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTCGCCTTGGAAATTGTCAGTGGGAGGGTCAACACCATACACCGGGCAAAGGAGGAAGCAATCTATCTTCTTGACTGGGCACGTATCTTGAAAGAAAAAGGAGAATTACTAGAACTAGTTGATCGAAGGTTAGGATCAAACTTTGACAAGGAGCAAGTGATGGTGATGATCCAAGTGGCTCTCCTATGCACCAATGTCACACCAGCACTCAGGCCTGCCATGTCTTCAGTGGTAAGCATGCTTGAAGGTAAGAGTGTGGTTGAGGAGATAGTTTCAGAATCAAGTGAGGTATTGGATGAGAAGAAGTTGGAGGCAATGAGGATGTTATACAAACAGATGGAAGAAGATAAGATAACTGAGATTGAAGAACAAGGTACATCAGTAGATGAACTGTATGCTGCTTCATCTACATCAGCATCAGATCTCTATCCTCTACATTTGGATTCCTCTTACTGGGATAAAAGATATTAG 2232 0.4068 MKYNYESCPQYYCLLVLLLFCFFSTFALGVTSPDEAEKLGKNDWELKLDPCTNWTRNDEDIVFSCSLGGDGFDHVTVISVFGNRLTGTIPRELGNISNLTSLDLEFNQFSGNLPPELGNLIKIERFGIGDNQFSGKIPDFIQDWTSLMSMRIYGSGLSGPIPSVFSLMENLTELIITDLNGSEYSPLPELDYNLTKLETLILRNCNINGTIPGYLGNMTALKYIFLTRNLLTGPIPTWIDNVASTMDMNLFASSSMGNNSGMPVCGTRVRENLNIAEEAEGVGKAVIKSFTAEVTDSTLEIRFYWAGKGTTAIPYKSVYGPLISAISVESDFPDGLSTGAVIGIVVAGAVIVILAFCILWWRGCIGNRSSLAKDLEGLDLRTGIFTFKEIKVATNNFNIANKIGEGGFGPVFKGKLPNGTIIAVKQLSTKSKQGNREFINEIGMISALQHPHLVKLYGCCVEGDQLLLIYEFMENNSLARALFGSEEFRLKLDWPIRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLVEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRVNTIHRAKEEAIYLLDWARILKEKGELLELVDRRLGSNFDKEQVMVMIQVALLCTNVTPALRPAMSSVVSMLEGKSVVEEIVSESSEVLDEKKLEAMRMLYKQMEEDKITEIEEQGTSVDELYAASSTSASDLYPLHLDSSYWDKRY 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0603 743 Gene3D Transferase(Phosphotransferase) domain 1 473 686 - -
Lele11g0603 743 Pfam Malectin domain 266 326 IPR021720 -
Lele11g0603 743 SUPERFAMILY Protein kinase-like (PK-like) 381 671 IPR011009 -
Lele11g0603 743 SUPERFAMILY L domain-like 70 241 - -
Lele11g0603 743 SMART serkin_6 397 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0603 743 ProSiteProfiles Protein kinase domain profile. 397 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0603 743 CDD STKc_IRAK 403 670 - -
Lele11g0603 743 FunFam Leucine-rich repeat receptor protein kinase EMS1 71 164 - -
Lele11g0603 743 Gene3D Phosphorylase Kinase; domain 1 367 472 - -
Lele11g0603 743 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 264 698 - -
Lele11g0603 743 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 366 472 - -
Lele11g0603 743 Pfam Protein tyrosine and serine/threonine kinase 399 667 IPR001245 GO:0004672|GO:0006468
Lele11g0603 743 Gene3D Ribonuclease Inhibitor 60 264 IPR032675 -
Lele11g0603 743 Gene3D - 265 331 - -
Lele11g0603 743 FunFam Putative LRR receptor-like serine/threonine-protein kinase 473 680 - -
Lele11g0603 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0603 Lele-ChrLele11 5916135 5927392 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0603 271 728 Receptor kinase-like Gene Family AT1G53420 62.931 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele11g0603 PK_Tyr_Ser-Thr 3.6e-48 CL0016