Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0602 ATGTTGAGAGGCCTGAACATATCTGGAGTTATCCCCAACGAGTTCGGAGATCTCACCCGGCTGAATGTCCTGTCCATGGTGGGGAATCGACTTAGTGGTTCAATTCCTGCAGAATTCGGTGAAATTGCTACCCTACAGGAGCTACTTCTTTCTGCAAATAATTTTACAGGGATAATACCAGAAACATTTGGAAATCTCAAGAACCTCACTGATTTTGTAAAGGAAAATAATGTGGATGCAACCATGCATGATCTTGTAAAACCCTCAATTTGCATTTGTATTTCAATCCCAATTGTGATAGACTTCAATGTTCCTTCACAAGAGTTCTCTACTGCTGACCAAGGAAAAGAAAAAGGGCTCTCTGGTGGAGCTGTCGTTGGAATTGTGGTTGGATTATGTGTATTTCTTATACTGGTGTTTCTCATTATCATCCAAAAGAATGGTTTCCTTGGTGGGAAAGATTCACAATACCTAGTTAAGAAGCTATCTGCTAAATCAAGGCAAGGGAATCGTGAATTTCTAAATGAAATAGCCATGATTTTTGCTTTGCAGCACCCTTGTCTTGTTCAGCTTTATGGCTGTTGTGTTGAAGGAGATCAGTCATTGCTGATATATGAGTTTATGGATAACAATAGCCTTGCTCATGCTTTATTTGGCCCAGAAGAATCCCAGCTAAAATTGGAGTGGCCAACAAGACACAAGATTTGTGTTGGGATTGCTAGAGGCTTTATCCAACTTTTCCAAATTAAAATTGTGCATGTATACACTGTTGTTATCTATCAGGCACATCAGTTGAAAGAGGGAGGTAATCTGATGGAGCTGGTGGATACAAGGTTGGGTGAGAACTTTAACAGAGAGGAAATAATGATTGTGGTAGAAGTGGCTCTCCAATGCACTGAAAACTCTCCAGCACTTAGGCCTACCATGTCTAAGGTTGTTAGCATTCTTGAAGGCAGGCCTACTGTTCTGGAGACAGTGTCAGATGATGAAAGTGAGATTATTATGGATGATGATGGTGAATTGAAACTGAAATCGACTTGCAAGAAAGAAGATGATAGAGATGAGATTGATCAGGCCCTGAACTCGTCAAGCCATGAATCTCAGGCCACATCTAAATCCGTTTCAGATCTCTTTCCGGCAGATAAAAATTCTTCTTTCTGGGAGAAAACCAACTAG 1176 0.4065 MLRGLNISGVIPNEFGDLTRLNVLSMVGNRLSGSIPAEFGEIATLQELLLSANNFTGIIPETFGNLKNLTDFVKENNVDATMHDLVKPSICICISIPIVIDFNVPSQEFSTADQGKEKGLSGGAVVGIVVGLCVFLILVFLIIIQKNGFLGGKDSQYLVKKLSAKSRQGNREFLNEIAMIFALQHPCLVQLYGCCVEGDQSLLIYEFMDNNSLAHALFGPEESQLKLEWPTRHKICVGIARGFIQLFQIKIVHVYTVVIYQAHQLKEGGNLMELVDTRLGENFNREEIMIVVEVALQCTENSPALRPTMSKVVSILEGRPTVLETVSDDESEIIMDDDGELKLKSTCKKEDDRDEIDQALNSSSHESQATSKSVSDLFPADKNSSFWEKTN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0602 391 Gene3D Transferase(Phosphotransferase) domain 1 256 339 - -
Lele11g0602 391 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 80 - -
Lele11g0602 391 SUPERFAMILY L domain-like 2 77 - -
Lele11g0602 391 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 263 351 - -
Lele11g0602 391 MobiDBLite consensus disorder prediction 358 391 - -
Lele11g0602 391 MobiDBLite consensus disorder prediction 361 391 - -
Lele11g0602 391 Pfam Protein tyrosine and serine/threonine kinase 154 253 IPR001245 GO:0004672|GO:0006468
Lele11g0602 391 Gene3D Ribonuclease Inhibitor 1 91 IPR032675 -
Lele11g0602 391 SUPERFAMILY Protein kinase-like (PK-like) 153 253 IPR011009 -
Lele11g0602 391 Gene3D Transferase(Phosphotransferase) domain 1 146 254 - -
Lele11g0602 391 SMART tyrkin_6 138 316 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0602 Lele-ChrLele11 5905338 5911899 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0602 2 87 Receptor kinase-like Gene Family AT1G53420 42.529 2.65e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele11g0602 PK_Tyr_Ser-Thr 4.2e-13 CL0016