Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0601 ATGGAGTTTGCCATTTCGAGCTCCAAACTTTTCTCTCTATTCTTCTTCAGATTTCTTCTGCTATGTTTCTTCACAGATTTTCCATCAAATGCTCAACTTATACCCCAACAAGAAGTGAAGGCTTTACAGGCAATATCTGATGAGCTCACAAACGTGAAGTGGAAGGTGACACCAACATCTTGTATTAAAGGAGATGGATTTAATAACCCCTTTACTTCTTCATCCTCTGGAGTAACCAGGAATGTCACTTGCGATTGCACTTTTCAAAGTGGTACCGTTTGTCATGTCACTAATATTCTGTTGAAAAGCCAAAATATAGCCGGAGAAATACCCACTGAATTTGGAAATCTCACTCATTTGACTGAACTTGATCTTTATTTCAACTATCTCAATGGCACAATTCCAACGTCTTTTAGGCACATCCCTCTTGTCACTCTGTCCCTTGTGGGGAATCGCATTAGTGGTTCAATTCCCGAAGAATGGGGTGAAATTGCCAGTCTGATGGATTTGGTCCTTGAAGATAATCAGCTTGGAGGACGTCTTCCTCATAGTCTTGGAAATTTGAGAAACTTACGGAGAATACGTCTTTCTGCGAATAATATTACTGGAACAATACCAGAAACGTATGGAAATCTGAAGAACATGATTGATTTTTCTATAGATGGGAGTAACTTATCAGGAAAGATACCAAGTTTTATTGGGAACTGGTCCAAAATTCAATATATGGATATGGAGGGCACAGGCATGGAAGGCCCGATTCCTTCTACCATATCGTTGTTAACAAATTTGATAGAATTGAGAATATCCGACTTGAAAGGAACAACAACTATGAAATTTCCTAATCTGAAGAATTTGACGAGTTTGCAACGACTGATATTAAGGAATTGCTTAATTACTGGTCCCATTCCACCGTATATTGGTGAAATGAAAAACTTGAAGACCTTGGACCTGAGCTTTAACATGTTGACTGGCTCAATCCCTGACTCATTTCAAAACTTGTTGAGTTTTAATCACATGTTTCTGACAAACAATTCTCTGAGTGGAGCAATTCCAGAATGGGTTCTACAGAACAAACAAAATATTGATTTATCTTACAACAATTTTACTGAGGCTGCTACCTCTGATTGCCAGATCTTACAAGTGAACTTGGCTTCCAGCCTTTCATCTTCAGTAAGAAATGCATCCTTTTGTCTGAAGAAGGGCCTACCTTGTCCAGGAAAACCTCAGTGGAAAGGTACTACTACAATTCCCAACAGAGGTGTATATGGACCTCTAATATCTGCCATCACTGTGACCCCAAATTTCAAAGTTCCTTCGAAAGGGTTTTCTGTTGGAGCTATTGTTGGAATTGTTGTTGGATCGTGTGCCTTCCTTGTACTCGTATTCATTGTCCTCAGAAAGAAGGGTTTCCTTGGTGGGAAGGATCCAAAAGACAAAGAACTTGTAGATCTGAAGACTGGTTATTTTTCTTTACGACAAATTAAAAATGCAACCAATGACTTTGACCCTGCAAATAAGATTGGAGAAGGTGGCTTTGGGCCTGTGTATAAGGGTGTGTTGTCTGATGGTGTGGTCATCGCTATTAAGCAGCTATCATCCAAGTCAAAGCAAGGAAATCGTGAATTTGTTAATGAAATAGGAATGATTTCTGCTTTGCAACATCCAAATCTTGTGAAGCTTTACGGTTGTTGCATCGAAGGAAATCAATTATTACTTGTATATGAATACTTGGAGAACAATAGTCTTGCTCGAGCACTTTTTGGCAGTGATGAACAAAGGATACACTTGGACTGGCCCACAAGAGTAAAGATTTTTCTGGGGATAGCGAGGGGATTGGCTTATCTTCACGAGGAGTCAAGGTTGAAAATAGTACATAGGGACATTAAGGCAACAAACATCTTACTAGATAAAGATCTGAATGCCAAAATCTCTGATTTTGGTTTAGCCAAGCTTGATGAAGGAGACAATACCCATATCATCACTCGAGTAGCCGGAACAATTGGTTATATGGCTCCTGAATATGCAATGAGAGGTTACTTGACAGACAAAGCAGATGTTTATAGCTTTGGAGTTGTCGCTTTGGAGATTGTCAGTGGAAAGAGCAATGCAAATTACATGCCAATGGATGACTATGTTCATCTTCTTGACTGGGCCTACGTTCTCCAAGAGCAAGGGAAGCTTCTAGAATTGGTGGATCCTCGTCTCGGTTCGAGCTACTCCAAAGATGAGGCCATGAGAATGCTAAATTTGGCTCTTCTGTGCACTAGTCTATCCCCCACTCTCAGACCCTCCATGTCATCTGCGGTGAGCATGCTTGAGGGAAAAACTCCAATCCAAGCACCAAAAATAAACAAGAACAAAGATCAAGATGCGAGGTTCAAAGCCCTTGAGATGCTGTCATATGATAGCCAGACATCTGTAAGTATGGAACAAAGAGGCAAGTCAATGGATGGGTCATGGGTTGACTCCTCAATATCTCTTCCAAGTAAGGATGTTTTTTCTTCATCTAGTAAGCTTCTTGAAGATTAA 2529 0.4017 MEFAISSSKLFSLFFFRFLLLCFFTDFPSNAQLIPQQEVKALQAISDELTNVKWKVTPTSCIKGDGFNNPFTSSSSGVTRNVTCDCTFQSGTVCHVTNILLKSQNIAGEIPTEFGNLTHLTELDLYFNYLNGTIPTSFRHIPLVTLSLVGNRISGSIPEEWGEIASLMDLVLEDNQLGGRLPHSLGNLRNLRRIRLSANNITGTIPETYGNLKNMIDFSIDGSNLSGKIPSFIGNWSKIQYMDMEGTGMEGPIPSTISLLTNLIELRISDLKGTTTMKFPNLKNLTSLQRLILRNCLITGPIPPYIGEMKNLKTLDLSFNMLTGSIPDSFQNLLSFNHMFLTNNSLSGAIPEWVLQNKQNIDLSYNNFTEAATSDCQILQVNLASSLSSSVRNASFCLKKGLPCPGKPQWKGTTTIPNRGVYGPLISAITVTPNFKVPSKGFSVGAIVGIVVGSCAFLVLVFIVLRKKGFLGGKDPKDKELVDLKTGYFSLRQIKNATNDFDPANKIGEGGFGPVYKGVLSDGVVIAIKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNSLARALFGSDEQRIHLDWPTRVKIFLGIARGLAYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEGDNTHIITRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNANYMPMDDYVHLLDWAYVLQEQGKLLELVDPRLGSSYSKDEAMRMLNLALLCTSLSPTLRPSMSSAVSMLEGKTPIQAPKINKNKDQDARFKALEMLSYDSQTSVSMEQRGKSMDGSWVDSSISLPSKDVFSSSSKLLED 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0601 842 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 279 371 - -
Lele11g0601 842 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 205 272 - -
Lele11g0601 842 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 473 576 - -
Lele11g0601 842 Pfam Protein tyrosine and serine/threonine kinase 505 729 IPR001245 GO:0004672|GO:0006468
Lele11g0601 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Lele11g0601 842 Gene3D Phosphorylase Kinase; domain 1 472 576 - -
Lele11g0601 842 SMART serkin_6 501 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0601 842 SUPERFAMILY L domain-like 90 369 - -
Lele11g0601 842 ProSiteProfiles Leucine-rich repeat profile. 311 333 IPR001611 GO:0005515
Lele11g0601 842 ProSiteProfiles Protein kinase domain profile. 501 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0601 842 FunFam Putative LRR receptor-like serine/threonine-protein kinase 577 784 - -
Lele11g0601 842 Gene3D Ribonuclease Inhibitor 67 257 IPR032675 -
Lele11g0601 842 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 204 - -
Lele11g0601 842 SMART LRR_typ_2 117 140 IPR003591 -
Lele11g0601 842 SMART LRR_typ_2 309 332 IPR003591 -
Lele11g0601 842 SMART LRR_typ_2 188 211 IPR003591 -
Lele11g0601 842 Gene3D Ribonuclease Inhibitor 265 387 IPR032675 -
Lele11g0601 842 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 411 803 - -
Lele11g0601 842 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Lele11g0601 842 CDD STKc_IRAK 507 774 - -
Lele11g0601 842 Gene3D Transferase(Phosphotransferase) domain 1 577 791 - -
Lele11g0601 842 SUPERFAMILY Protein kinase-like (PK-like) 486 775 IPR011009 -
Lele11g0601 842 MobiDBLite consensus disorder prediction 803 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0601 Lele-ChrLele11 5897551 5904425 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0601 101 832 Receptor kinase-like Gene Family AT1G53430 50.255 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele11g0601 PK_Tyr_Ser-Thr 9.6e-48 CL0016