Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0591 ATGCGAAGGCCCTATGTTCCTTATAAAGCTTACACGAGGATTCTATTGATGGGCAATGCAATGCTCTTTTTTCTCGCCTTGTTTCAATGCTTTCCTTCGCACAATGTGTTTGAAATTCACCTGAATGAAGTGGCTTCCATAGCCCAGCGTTTCACCGAATGCTCTCCTAATAAGTCTCCTGTCTACTATGTGGCAATTGTTCTGCTTTTGCTTTTCGGGGAGGAAGTTGCTCCGAGGAGGGCTTCTCATGCACAATACCTGGAGGGAACTGCTAGGGGGCTTAGTGAGGGATGTGAAAGACAAGATGTGAGGCCTTATAGACAACGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCAGCAGTTAGGAGAGGCGAAGATTCATGGTCTCTGGAGATTAGTGCTGGAGGTCTAGTTACCGCTCTTTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGCTGGGCTGGGGTCAACGTGCCAGACGAGATTGGACAGAAGGCACTTACTAAAGCTTTAGCTGAAAAGCTCCTTCATTCTGTTCTTGCTGCTGATTTAGTAGGATTTCATACGTATGATTATGCACGCCATTTCGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGCACTCCTGAAGGGGTTGAGGATCAGGGGAGATTGACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCTGATCGATTCATTCGTGCACTTGAGCTTACTCAAGTGAAGGAACATATCAAAGAATTGGAAAAAAGATTTGAGGGTAGAAAGGTAATGTTAGGTGTTGATCGTCTTGATATGATTAAAGGGATTCCTCAAAAAATTCTTGCATTTGAAAAGTTTTTGGAAGAGAATGCATATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCCGTGCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAAGTTCATGAAATTGTTGGCCGCATTAATGGAAGATTTGGAACATTGACTGCTGTTCCTATACATCACCTGGACCGTTCACTTGATTTTCATGCACTATGTGCTTTATATGCTATTACTGATGTAGCACTAGTCACATCTTTGAGGGATGGGATGAATCTTGTCAGTTATGAATTTGTAGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTCGCTGGCGCTGCACAGTCCCTAGGCGCGGGAGCAATTCTGGTTAACCCCTGGAACGTCACAGAAGTTGCAGCTGCAATTGCACAGGCTCTGAATATGTCATCTGGGGAAAGAGAGAAACGTCATAAGCACAACTATGCACATGTAACGACCCACACTGCTCAAGAATGGGCAGAGACTTTTGTGAGTGAACTAAATGATACTGTGGTCGAGGCACAACTAAGGACAAGACAAATTCCGCCCCTACTTCCAACCAAGACTACAATTGAACGCTACCTGCAGTCAACTAATCGATTGCTTATATTGGGGTTCAATGCAACTTTAACTGAACCAGTGGAAAAGAAAGGTGATCAGATTAAGGAAATGGAACTCAAGGTGCATCCAGAATTAAAACAACCATTGACTGCACTTTGCAATGACCCAAAGACCACAATTGTTGTGCTTAGTGGAAGTGGTCGAAACGACCTATATAATAGCTTTAAGGAATACAACATGTGGCTAGCCGCAGAGAACGGGATGTTTTTACGCCCTGCAAAGGGAGAATGGATGACAACGATGCCAGAGCATCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTCGAATACTTCACAGCAAGAACCCCGCGGTCTCATTTCGATCTTGAAGAAAGGGAGACCTCGCTTGTATGGAACTACAAATATGCCGATGTTGAGTTTGGAAGACTTCAAGCAAGGGATATGTTGCAACATCTCTGGACTGGTCCAATTTCCAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCAGTCGAAGTGCGAGCTGTTGGTGTTACCAAGGGAGCAGCCATTGACCGCATCTTGGGTGAGATAGTTCACAGTAAATCCATGACAGAACCAATCGATTATGTTCTATGTATAGGACATTTTCTTTCAAAGGATGAAGATGTTTATTCCTTCTTCGAGCCGGAGCTTCCTTCTAGCGGCGTGGGTGTCACGCGAGCCAAGGTGTCGGAAGCAGGTAAGTTTTCGGCAGAGAGACGATATTCGCTGAAGATCCCGACCGGTACTAAAACTGGAACAAAGTCATCATCTCAAAATAAGGGACAACGGCCTCTGTCAAATTCTGAGAAGAAAACCACAAACCATAACTGTAATGCACAAAGGAAGGCAGCACCTGAGAAGATATCATGGAATGTGCTTGACCTCGACAAGGGGAATTACTTCTCTTGTGCCGTTGGCCGAACCCGAACAAATGCTCGCTATACGCTTGGATCTTCAGATGATGTTGTTTCCTTCCTCAAGGAACTGGCTCAAGCTTCTTCTTCTCCAAACCATTTATCAACCAATTAA 2505 0.4455 MRRPYVPYKAYTRILLMGNAMLFFLALFQCFPSHNVFEIHLNEVASIAQRFTECSPNKSPVYYVAIVLLLLFGEEVAPRRASHAQYLEGTARGLSEGCERQDVRPYRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVTALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKLLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALELTQVKEHIKELEKRFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAAAIAQALNMSSGEREKRHKHNYAHVTTHTAQEWAETFVSELNDTVVEAQLRTRQIPPLLPTKTTIERYLQSTNRLLILGFNATLTEPVEKKGDQIKEMELKVHPELKQPLTALCNDPKTTIVVLSGSGRNDLYNSFKEYNMWLAAENGMFLRPAKGEWMTTMPEHLNMEWVDSVKHVFEYFTARTPRSHFDLEERETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTEPIDYVLCIGHFLSKDEDVYSFFEPELPSSGVGVTRAKVSEAGKFSAERRYSLKIPTGTKTGTKSSSQNKGQRPLSNSEKKTTNHNCNAQRKAAPEKISWNVLDLDKGNYFSCAVGRTRTNARYTLGSSDDVVSFLKELAQASSSPNHLSTN 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0591 834 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 174 823 IPR001830 GO:0003824|GO:0005992
Lele11g0591 834 MobiDBLite consensus disorder prediction 738 773 - -
Lele11g0591 834 Pfam Trehalose-phosphatase 511 733 IPR003337 GO:0003824|GO:0005992
Lele11g0591 834 MobiDBLite consensus disorder prediction 738 772 - -
Lele11g0591 834 Pfam Glycosyltransferase family 20 175 456 IPR001830 GO:0003824|GO:0005992
Lele11g0591 834 SUPERFAMILY HAD-like 488 822 IPR036412 -
Lele11g0591 834 Gene3D - 578 660 - -
Lele11g0591 834 Gene3D Glycogen Phosphorylase B; 98 170 - -
Lele11g0591 834 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 578 660 - -
Lele11g0591 834 Gene3D - 512 693 IPR023214 -
Lele11g0591 834 CDD GT20_TPS 109 456 IPR001830 GO:0003824|GO:0005992
Lele11g0591 834 CDD HAD_TPP 489 720 - -
Lele11g0591 834 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 238 440 - -
Lele11g0591 834 Gene3D Glycogen Phosphorylase B; 171 237 - -
Lele11g0591 834 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 459 - -
Lele11g0591 834 Gene3D Glycogen Phosphorylase B; 238 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0591 Lele-ChrLele11 5797295 5806222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0591 145 828 Trehalose Biosynthesis Gene Families AT1G78580 75.250 0.0 1055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0591 11 5797295 5806222 Lele12g0743 12 15563799 15572033 ECH
Lele11g0591 11 5797295 5806222 Lele11g0591 11 5797295 5806222 ECH
Lele09g0580 09 4396599 4404496 Lele11g0591 11 5797295 5806222 hybridization
Lele10g0532 10 3851832 3859919 Lele11g0591 11 5797295 5806222 hybridization