Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0582 ATGGGAGCTAGTTTTCATCTTCAAGCCAAAGTTCCAAGCCTTGGAATCCAGAAATGGCTGATAAGGAAACTGAAGCTCCCCCCATGCCAACTTTCAGTTTCAGGTGCGTCAGCAGGGTATGCACTTTTGCTTTCTCTTATGCTACTAACAATTGAAAAGGTTTTGAAGAAGGAAACGTTTTCAGTTGTGTTGGAGACTCAGATTTGGACTGGTTTTGTTGCTTCTATTGCTTGTTCAGTTGGAGTTGTGGGATTAATCTATGTTGTGTCTTCACTTTTCTCTAACGTTGTTAGTATGAGGAGTTTGCCTCTTGTTCCTTTGTCTTCTGTTGTTTTGTACCATGAAGCAATGGATGCTATGAAGGTTGTGGCCTTGTTGCTGGCAATTTTGGGTTTTGGTTCTTATATCTATCAGAATTATCTTGATCAGAATATGCTGCCACACGAAGAAAATTTAGTTCATAGTCATGGTGTATTGTTTATTACGGTTAATCCAGCGGTGAACAGGTTCTTAAAGTGTATCAGAATCTCTTTGTGGATCCAAATGAGCAAGTCTCTGGTTTTAGCCTTTTATATCACCATATGCTGTATCTCTTTTGTCATTTCCAAGATCATCATCTCAATTCTTCTCTACAAAAGATGGAAAATAAATCACATGATATATGAAGAAGCTTATCCAGGTGGGAAGATGGTGATATTTAGATGTTCAGTGCTTCAATCAATAACATCTGATGTGGTTTTAAAGAAGACATTGAAACTGAGCAACAAGGACATTATAGGATGTGGTGGTTATGGGAGAGTTTATAAACTACAAATAGATGACAGCACAGCTTTAGCAGTGAAAAGACTCAACAAAGGAACTGCAGATAGAGAGAGAGGCTTTGAGAGAGAGTTGGAAGTAATGGCAGATATAAAACATCGCAATATTGTGACTCTTCATGGTTACTATACTGCCCCTCATTACAACCTTCTCATATATGAACTCATGTCTAATGGAAGCTTAGATTCCTTTCTTCATGAATACTTTGATACGGGAAGAGAAACTGTAAAAGGGGATGTTTACAGCTTTGGAGTTGTGTTATTGGAGCTTTTAACTAGGAAAAAACCCTGTGATGAAGCATTTATAGAGGAAGGAAACAAGCTCGTCACATGGGTGAAGGCTGTAGTTAAAGAGAGGAAGGAGGAGTTAGTTATTGACAACACCATGGGGTCTTGTCCCATGAAAGAGGTTGACAATATGTTCAATGTTGCAATGATGTGCCTTGAACCGGATCCTCTCAAGAGGCCAACCATGGCCGAGGTTGTCACCTTGCTGGAGCAAACAAACCCACACAAACTCGTTAAAGCTTCCTTCTGA 1356 0.3953 MGASFHLQAKVPSLGIQKWLIRKLKLPPCQLSVSGASAGYALLLSLMLLTIEKVLKKETFSVVLETQIWTGFVASIACSVGVVGLIYVVSSLFSNVVSMRSLPLVPLSSVVLYHEAMDAMKVVALLLAILGFGSYIYQNYLDQNMLPHEENLVHSHGVLFITVNPAVNRFLKCIRISLWIQMSKSLVLAFYITICCISFVISKIIISILLYKRWKINHMIYEEAYPGGKMVIFRCSVLQSITSDVVLKKTLKLSNKDIIGCGGYGRVYKLQIDDSTALAVKRLNKGTADRERGFERELEVMADIKHRNIVTLHGYYTAPHYNLLIYELMSNGSLDSFLHEYFDTGRETVKGDVYSFGVVLLELLTRKKPCDEAFIEEGNKLVTWVKAVVKERKEELVIDNTMGSCPMKEVDNMFNVAMMCLEPDPLKRPTMAEVVTLLEQTNPHKLVKASF 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0582 451 Pfam Protein tyrosine and serine/threonine kinase 255 340 IPR001245 GO:0004672|GO:0006468
Lele11g0582 451 Gene3D Transferase(Phosphotransferase) domain 1 344 445 - -
Lele11g0582 451 ProSiteProfiles Protein kinase domain profile. 253 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0582 451 FunFam Receptor-like serine/threonine-protein kinase 224 328 - -
Lele11g0582 451 ProSitePatterns Protein kinases ATP-binding region signature. 259 281 IPR017441 GO:0005524
Lele11g0582 451 Gene3D Transferase(Phosphotransferase) domain 1 236 343 - -
Lele11g0582 451 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 188 339 - -
Lele11g0582 451 SUPERFAMILY Protein kinase-like (PK-like) 235 442 IPR011009 -
Lele11g0582 451 Pfam Purine nucleobase transmembrane transport 78 143 - -
Lele11g0582 451 SMART serkin_6 253 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0582 Lele-ChrLele11 5728751 5735183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0582 47 142 Organic Solute Cotransporters AT1G44750 39.416 5.08e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele11g0582 PK_Tyr_Ser-Thr 3.4e-14 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0571 09 4326368 4334001 Lele11g0582 11 5728751 5735183 hybridization
Lele10g0522 10 3776751 3779876 Lele11g0582 11 5728751 5735183 hybridization