Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0579 ATGATCCCCACCATAAATCTCACCGTTGATGTGGTGCTCGTGGAGCATCTGTCCCCTCGACTGGGGAAGCTTGGGCCTGGAGATTTGGTGCTCGTTCACTCTCCCTTAAACCCTAGTCGGACATTGACGAAGCGCATTGTGGGCTTAGAAGGGTATAGGATCACTTACTTTGATCCTAGGCACGGGGATGTACCTCAAACTGCTGCGGTGGGCGTGCCAATGGGGCATGTTTGGATTCAGGGTGATAATATCTATGCCTCCCGTGAGTCACGACATTTTTGTCCTATTCCATATGGTCTTGTACAAGGAAAAGTGTGTTTTAGGTTTCCAAGGGGCTTCGTATTGCAAGATCCTTTTCTCTTAGCTTAG 369 0.4905 MIPTINLTVDVVLVEHLSPRLGKLGPGDLVLVHSPLNPSRTLTKRIVGLEGYRITYFDPRHGDVPQTAAVGVPMGHVWIQGDNIYASRESRHFCPIPYGLVQGKVCFRFPRGFVLQDPFLLA 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0579 122 PRINTS Bacterial leader peptidase 1 (S26A) family signature 42 54 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele11g0579 122 PRINTS Bacterial leader peptidase 1 (S26A) family signature 72 91 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele11g0579 122 SUPERFAMILY LexA/Signal peptidase 1 109 IPR036286 -
Lele11g0579 122 Pfam Signal peptidase, peptidase S26 3 57 IPR019533 GO:0004252|GO:0006465
Lele11g0579 122 Gene3D Umud Fragment, subunit A 1 113 - -
Lele11g0579 122 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 109 - -
Lele11g0579 122 CDD S26_SPase_I 1 105 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0579 Lele-ChrLele11 5716839 5717864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0579 1 108 MADS-box Gene Family AT1G29960 44.954 5.58e-27 95.1