Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0574 ATGATGTCAGTGGCGATCCAAAGCTTGGATTTTACTGCCAAAATCTGGCATGCTTGTGGGTGCTCTTCCAATGCTTCATTCGAGCCTTGTTCTGTGAGAAATTACGCCAAGGTGAATTCTAGAGTTTGGACTAGAGGCTATGGAGCTCGTAAATTGGCTTGCTATAGGCGAGATACCACTCAATGTGGAGTTTCTTCGATGAAGACCGTGGAGCCTGAACCTGCGGTAAATGGAAGAACTAAATTTAATCAAGACCTTTCAACAGGATTGGACTTGAAGAATTACCCAGAAAGCCCCATTTCTCCTGCCAAATTGTTTGAAGTGGTTGCTGATGACCTAGTAACTCTCAACAAAAACCTTAAAATAGAACTGATAACTGTCAGGTATATGCAAGTAGTTTTACATGATTCCTTCTATGTTGCTTTGGGAAATGAAAGCTCCAGGAAGGAAACTGTTCATCAACTGTATGGAACAAGAGTGGCAGTTTTGGCTGGAGACTTCATGTTTGCTCAATCCTCCTGGTATCTCGCTAACCTCGAAAACATTGAAGTTATTAAACTTATCAGCCAAGTGATTAAAGATTTTGCCAGTGGTGAAATAAAGCAGGCCTCTAGCTTGTTTGATTGTGATCTACAACTAGATGAGTATCTCATCAAGAGCTACTACAAAACAGCATCCTTGATCGCTGCCAGCGCGAAAGGCGCGTCGATTTTCAGTGGTGCTGACAGCTGCATGTCTGAGAAAATGTACGAGTATGGTAGAAGTCTTGGCCTGTCCTTCCAAATTGTGGATGATATATTAGATCTCACACAAACTGCAGAGCAATTGGGAAAGTTAAGATTGTCGATAACGTATGGCGAATTTGCTACTGGAGGCAATATTTTCGGTTTTGTGTACGCGCCTTGTATGATCCCCACCATAAATCTCACCGTTGATGTGGTGCTCGTGGAGCATCTGCCCCCTCGACTGGGGAAGCTTGGGCCTGGAGATTTGGTGCTCGTTCACTCTCCCTTAAACCCTATTCGGACATTGACGAAGCGCATTGTGGGCTTAGAAGGGTGTAGGATCACTTACTTTGATCCTAGGCACGGGGATGTGCCTCAAACTGCTGCGGTGGGCGTGCTTTGCAGTTTACTTCCCGCACTTATTTTGTTTTTGTGCCAATTGGGCATGTTTGGATTCAGGGTGATAATATCTAAGCCTCCCGTTTGGTTTATAATATTTCTTTCCCTTGTCTTGACTTTTGAGTTTCCAAGGGGCTTCGTATTGCAAGATCCTTTTCTCTTAGCTTAG 1293 0.4393 MMSVAIQSLDFTAKIWHACGCSSNASFEPCSVRNYAKVNSRVWTRGYGARKLACYRRDTTQCGVSSMKTVEPEPAVNGRTKFNQDLSTGLDLKNYPESPISPAKLFEVVADDLVTLNKNLKIELITVRYMQVVLHDSFYVALGNESSRKETVHQLYGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDLQLDEYLIKSYYKTASLIAASAKGASIFSGADSCMSEKMYEYGRSLGLSFQIVDDILDLTQTAEQLGKLRLSITYGEFATGGNIFGFVYAPCMIPTINLTVDVVLVEHLPPRLGKLGPGDLVLVHSPLNPIRTLTKRIVGLEGCRITYFDPRHGDVPQTAAVGVLCSLLPALILFLCQLGMFGFRVIISKPPVWFIIFLSLVLTFEFPRGFVLQDPFLLA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0574 430 SUPERFAMILY Terpenoid synthases 149 280 IPR008949 -
Lele11g0574 430 CDD S26_SPase_I 303 351 IPR019533 GO:0004252|GO:0006465
Lele11g0574 430 SUPERFAMILY LexA/Signal peptidase 301 359 IPR036286 -
Lele11g0574 430 ProSitePatterns Polyprenyl synthases signature 2. 256 268 IPR033749 -
Lele11g0574 430 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 149 286 - -
Lele11g0574 430 Pfam Polyprenyl synthetase 149 278 IPR000092 GO:0008299
Lele11g0574 430 Pfam Signal peptidase, peptidase S26 303 359 IPR019533 GO:0004252|GO:0006465
Lele11g0574 430 Gene3D Farnesyl Diphosphate Synthase 145 286 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0574 Lele-ChrLele11 5679351 5683508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0574 303 372 MADS-box Gene Family AT1G29960 39.437 1.61e-09 53.9