Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0564 ATGGCCGAAGGCGAAAAACCAAACAAAGCCGGACATTTCTCCGGCCAACAATATCCCAGTGCGCCGCCTCAATACGGCACATACTATCCTCCTCCTACTCCTCCACCTCCACCTCCTCCTCATCCTCCTCCTCCGCCTCCGCCTCCACCAGAACCACAGCCGCCGACTGGCTTCCCCAAACCTGTTCCTCCGCCGGGTTCTGTCCAGCCCCCTCCCGTTCCACCTGATTATTACGCTCAGGGCTACCAAGCTGTTCCTGGATATCCCGTAGCTGAAGGAAGACCTGCAAGACCTCGCCGTCTTCGTTGTTGTGGTCTTGGTTGTGGCTGGTGCCTGTTTATATTAGGATTCTTCCTTGCAACGATACCGTGGTATGCTGGGGCAGTTATTCTGATGTGTTCCAGAAGATATGAAATAGACTCCAGAGAGAAACCTGGATTGCTTGCTTGTTCTGTTGCTGCTGTTATCGTTACTATTGCTATTATTATTGGTGCGACGAGGGGAGCAAATCTCTGGTAA 519 0.526 MAEGEKPNKAGHFSGQQYPSAPPQYGTYYPPPTPPPPPPPHPPPPPPPPPEPQPPTGFPKPVPPPGSVQPPPVPPDYYAQGYQAVPGYPVAEGRPARPRRLRCCGLGCGWCLFILGFFLATIPWYAGAVILMCSRRYEIDSREKPGLLACSVAAVIVTIAIIIGATRGANLW 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0564 172 MobiDBLite consensus disorder prediction 24 76 - -
Lele11g0564 172 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 3 172 IPR044804 -
Lele11g0564 172 MobiDBLite consensus disorder prediction 1 76 - -
Lele11g0564 172 PRINTS Proline rich extensin signature 59 75 - -
Lele11g0564 172 PRINTS Proline rich extensin signature 20 32 - -
Lele11g0564 172 PRINTS Proline rich extensin signature 34 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0564 Lele-ChrLele11 5596785 5598150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0564 25 172 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 30.890 7.66e-20 80.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0564 11 5596785 5598150 Lele11g0564 11 5596785 5598150 ECH
Lele09g0556 09 4206477 4211633 Lele11g0564 11 5596785 5598150 hybridization
Lele10g0512 10 3712337 3713675 Lele11g0564 11 5596785 5598150 hybridization