Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0548 ATGAGTGGGGTTGGGTTATCTTCAATTTTAGCTGCATTTTACATACGGCTTCTGTACTTCTTAGCGCACTGGATCATTTCTGCTGACAAATTCATAGATAGGGGCGACAAAGAACTGCCTCACAGAGAAAGATGGGATTCAAAACTAAGGGATAAAGGAGACACTGTCATTCGTAGTTATAATTATATGGCCAACACAACCAGTAGTGCTTTATCATGGATCAATGTTGCCCATGCACATATAAATTGTCTTCTGAGACCTGCAAGATTACTCACGAAATTTCATTCCTCGTCTGCAACTTTGGCTGTTAATAATGGAGCATCGCACGTCTCCTTTGGAAAGTGGGGGCACAAGTGGAAAAGACAGTTTGATAGGACCTGCTCGACCAGCGACTTTGTCATTGCTGATGATGAAAAATATGGCAATAAGCAGGTCGTCAGTCTTAGTCCCCGCCTTTATGATTATGTCCCGAAGAACGTTCGAGAACCAGAGATTTTGAGGCAATTGCGTGAGGAGACGGCCTCTAGGCGTGGAAGCCAGATGCAGGTGTCTCCGGATCAGGCACAACTGCTTGCAATGCTTGTGCAAATTCTTGGAGCAGAACGTTGTATTGAAGTTGGTGTTTATACGGGATACTCATCTTTGGCCATAGCTTCAGTCCTACCAGAATCTGGTTGTTTAGTTGCCTGTGAAAGAGACGCCAAATCTCTTGAGGTTGCCAAGAAATATTATCAGCTAGCTGGTGTTTCGCATAAGGTGGATGTAAAATTTGGACTCGCCGCAGATACCCTACAATCTTTAATTTTGGATGGTGAAGCTGGCAGCTATGATTTTGCATTTATTGATGCTGATAAAAGGATGACCCAGGAATATTTTGAACTGCTGCTGCAGCTGGTGAGAGTTGGAGGTCTCATTGTAATTGACAATGTTCTGTGGCACGGAAAAGTTGCCGACCCACTGGTGAATGACCCTAAAACTATCAGCATTAGAAACTTTAATCAACAGTTGGTCCAGGACAAGCGTGTAAGCATCAGTATGGTGCCAATCGGAGATGGAATGACAATCTGCCGAAAAAGATGA 1080 0.438 MSGVGLSSILAAFYIRLLYFLAHWIISADKFIDRGDKELPHRERWDSKLRDKGDTVIRSYNYMANTTSSALSWINVAHAHINCLLRPARLLTKFHSSSATLAVNNGASHVSFGKWGHKWKRQFDRTCSTSDFVIADDEKYGNKQVVSLSPRLYDYVPKNVREPEILRQLREETASRRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIASVLPESGCLVACERDAKSLEVAKKYYQLAGVSHKVDVKFGLAADTLQSLILDGEAGSYDFAFIDADKRMTQEYFELLLQLVRVGGLIVIDNVLWHGKVADPLVNDPKTISIRNFNQQLVQDKRVSISMVPIGDGMTICRKR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0548 359 CDD AdoMet_MTases 202 307 - -
Lele11g0548 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 359 IPR029063 -
Lele11g0548 359 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 142 359 IPR002935 GO:0008171
Lele11g0548 359 PANTHER O-METHYLTRANSFERASE-RELATED 142 358 - -
Lele11g0548 359 Pfam O-methyltransferase 160 358 IPR002935 GO:0008171
Lele11g0548 359 Gene3D Vaccinia Virus protein VP39 134 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0548 Lele-ChrLele11 5393214 5396459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0548 118 347 Monolignol Biosynthesis Gene Families AT3G62000 76.395 5.44e-130 374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0541 09 4045252 4047293 Lele11g0548 11 5393214 5396459 hybridization
Lele10g0499 10 3542680 3544877 Lele11g0548 11 5393214 5396459 hybridization