Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0545 ATGCCACTAACTTCCCTAATAATGGCCACACATTACTTGGTATCAACACACTTGGACAACTTCGACATCGACAAGAAAGCCAACAAGGTGGCTCGTAGGATCGTTGCTACGGATTCAGAACTTGAGAAGAGGATGAAGTTTGAGACAAAAGACGTCATGGTAGTGAAAGAGAGGTTGGAGGAATATGGATGTATCTTCTTAGCAGCTTTTGTGGGAATGTGCAGAGAAGCAAAACTGAAGATTTTGGGACATTTGGGTAAGTATATGAAGGAAGGAGGGTTTTTGCTTGTGAGAAGTGCAAAAGGGGCAAGAGCTTTCTTGTACCCTATTGTGGAGGAACATGACGTGGCCAATTTTGAGGTTCTTACTATATTTGATCCCACAAATGATGTCATCAACTCTGTTGTTCTTCTTCGCAAGCCTAAGGTTTAG 432 0.4236 MPLTSLIMATHYLVSTHLDNFDIDKKANKVARRIVATDSELEKRMKFETKDVMVVKERLEEYGCIFLAAFVGMCREAKLKILGHLGKYMKEGGFLLVRSAKGARAFLYPIVEEHDVANFEVLTIFDPTNDVINSVVLLRKPKV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0545 143 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 143 IPR004298 GO:0030410|GO:0030418
Lele11g0545 143 Pfam Nicotianamine synthase protein 1 142 IPR004298 GO:0030410|GO:0030418
Lele11g0545 143 PANTHER NICOTIANAMINE SYNTHASE 3 1 141 IPR004298 GO:0030410|GO:0030418
Lele11g0545 143 Gene3D Vaccinia Virus protein VP39 1 142 IPR029063 -
Lele11g0545 143 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 100 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0545 Lele-ChrLele11 5376303 5376734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0545 1 140 Nicotianamine Synthase Gene Family AT5G56080 52.857 1.42e-47 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0496 10 3527207 3528061 Lele11g0545 11 5376303 5376734 hybridization