Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0537 ATGGCGGGCGAGGTAGTTCTGTTGGATACATGGGTGAGCATGTTTGGAATGAGGGTTAGGATCGCACTGGCAGAGAAGGGTGTGAAGTATGAGTATAAGGAAGAGAATCTGCGTAACAAGAGCCCTCTGCTTCTGCAAATGAATCCGATTCACAAGAAAATCCCAGTTCTAATCCACAACGGCAAACCCATCTGCGAATCCGCCATTATTGTGGAGTACATCGACGAGGTGTGGAAGGACAAATCTCCGCTTTTGCCTTCAGATCCATACGAGCGAGCTCAAGCCAGGTTCTGGTTTGATTTCATTGACAAAAAGGTGTATGAGACATGGAGGAGAATGTGGCTATCAAAAGGAGAGGAGCACGAGGCAGCGAAGAAGGAGCTGCTAGACATTTTTAAGCTTCTGGAAGGGACACTTGGGGACAAGCCCTTTTATGGGGGTGACTCATTTGGGTTTCTTGATGTTGGCTTGATCCCATTTTCTTGCTGGTTTTACACATTTGAGACTTATGGACACTTCAAGATGGAGGCAGAGTGCCCTAAACTCATGGCTTGGGTCAAGAGGTGCGTTCAGAGCAAAGAGAGTGTGTCCAAGACTCTTCCTGATGAGAAGAAGGTCTATGAATATATTGTGGCCTTAGAGAAGGTGGCCACTTGGGTGTGCCTGCCAAATTATGGTAATGTTTCTGTAAGATATGAACTTTGTGAAGTAAATAAAACCCCTTTTGCCATTTGCTTCTTCATTCTCATATACACAAACAATACACAATTGGGAGATGTTGGAGGAAGGATTTGGGCAGGAAAGAAAGAAGAAAGAGAAGACGCAAAGAAAGAGATGATAGAGAGCTTGAAGCAATTGGAAGAGACACTTGGAGACAATGCTTTCTTTGGAGGTGAAACCTTTGGGTTTGTCGACATTGCTCTGATTCCATTCTATCCCTGGCTTCGCACTTGTGAGGACTTAAGCAACTTGAGAGTGGAAAAACTGTCTTATGCTCAAAGCTTGGGCTATCAGATGCTTGCACAGGCCAAGTGTAATTAA 1041 0.4476 MAGEVVLLDTWVSMFGMRVRIALAEKGVKYEYKEENLRNKSPLLLQMNPIHKKIPVLIHNGKPICESAIIVEYIDEVWKDKSPLLPSDPYERAQARFWFDFIDKKVYETWRRMWLSKGEEHEAAKKELLDIFKLLEGTLGDKPFYGGDSFGFLDVGLIPFSCWFYTFETYGHFKMEAECPKLMAWVKRCVQSKESVSKTLPDEKKVYEYIVALEKVATWVCLPNYGNVSVRYELCEVNKTPFAICFFILIYTNNTQLGDVGGRIWAGKKEEREDAKKEMIESLKQLEETLGDNAFFGGETFGFVDIALIPFYPWLRTCEDLSNLRVEKLSYAQSLGYQMLAQAKCN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0537 346 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Lele11g0537 346 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lele11g0537 346 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Lele11g0537 346 Gene3D - 88 219 - -
Lele11g0537 346 Pfam Glutathione S-transferase, C-terminal domain 271 318 - -
Lele11g0537 346 Pfam Glutathione S-transferase, C-terminal domain 120 188 - -
Lele11g0537 346 SUPERFAMILY GST C-terminal domain-like 76 213 IPR036282 -
Lele11g0537 346 FunFam Glutathione S-transferase U20 88 219 - -
Lele11g0537 346 CDD GST_N_Tau 5 78 - -
Lele11g0537 346 SUPERFAMILY GST C-terminal domain-like 250 326 IPR036282 -
Lele11g0537 346 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 209 IPR010987 -
Lele11g0537 346 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 263 325 IPR045073 -
Lele11g0537 346 FunFam Tau class glutathione S-transferase 1 87 - -
Lele11g0537 346 CDD GST_C_Tau 254 326 IPR045074 GO:0004364|GO:0006749
Lele11g0537 346 Gene3D - 246 335 - -
Lele11g0537 346 Coils Coil 269 289 - -
Lele11g0537 346 CDD GST_C_Tau 89 213 IPR045074 GO:0004364|GO:0006749
Lele11g0537 346 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Lele11g0537 346 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Lele11g0537 346 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 223 346 IPR010987 -
Lele11g0537 346 Gene3D Glutaredoxin 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0537 Lele-ChrLele11 5309064 5311305 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0537 254 327 Glutathione S-transferase Gene Family AT1G78380 47.297 7.19e-16 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0537 09 4017343 4018043 Lele11g0537 11 5309064 5311305 hybridization
Lele10g0495 10 3522409 3523178 Lele11g0537 11 5309064 5311305 hybridization