Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0527 ATGTATATAATGGTGGGCAACGTTCAAGGAGCAATGGCTTATCTTGCTTCCCCTGTCAGTTTGGGAGGTCTAGTTGGAGTGAGTTCTTCTGGGAGGACCCACTCTATTGGAAGAAGAGTTTCTCTTTCTGGAGGAAACTTTGAAGGTAGAAGGACATGGCATTGTATCTCCTTGTCACTTTGTAGATATTCGGTGACTACAACGGATTTCATACCGGACCAAGGCAATTCAGTGTCTCTTGACTCTAACAGTGATAGAGGAAGTACGGGCACTGGAGATAATAATGCTGGTTTTGTCCTTAAGCCACCTCCAAAGCCGGTATTGAAGTCTTCAGAGACCATGGGTAACTCCGTTTTAGGTGCAAGTTCAGAAGGATGGGATCCCTCGAAAGCTAAGCAATTTGGTAATGAAAAGTTAGATGATGTTGAAGAGAGGAATAAGGTGATTGAGTCACTTGGAGAGGTGTTGGAGAAGGCTGAAAAGCTGGAAAATTCAAAGTTTGATGGCAAAAGAAATAATGGACCAGTTAGCAAACGTGCAATGTCTAATACAACCACTAATCCTAAGACTGATGAATTGGCAAACTCAACGACAAACCAGCAGTCTAGAACTGTGAAGAGCGTATGGCGTAAAGGGGACTCAATTGCTAATGTGAAGAAGGTTGCTAAGGAAACACCCAAGCCTAAAACTAAGAATGGAGGAGAGAAATATCAAACAGGAGGTGGAGGAAAGGTGGCATTTCAGCCGCCTACTCCTCCACGAGCTCCTCAGCCTTTGTTACAAGCTAAACCAGCTGTAGCTCCCCCACCCGTCAAAAAACCTGTTCTGAAGGACAATGGAGCTGCTGGAACATCTGTTAAAGATAAAGAGAGGAAAGGGCCAATTTTGATTGACAAGTTTGCTAGCAAGAAACCGGTAGTTGATCCTCTAATTGCTCAAGCTGTTCTAGCTCCTACAAAACCAGGAAAGGGCCCTCCTCCTGGAAAGTTTAAAGTTGATTACCGGAAGAAAGGTTCTCCAACTGGAGGTCCAAGGAGAAGAGTATTAGATGATGATGTCGAGCCCGATGAGGATACATCAGAACTTGATGTCTCTATTCCTGGTGCTGCAACAGCAAGAAAAGGGAGGAAGTGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTTCAGGCTGCCAAGGAGGCTGCTCCTGTCAAAGTAGAAATTCTAGAGGTCAGTGATAAAGGTATGCTGATAGAGGAGTTAGCCTACCACTTGGCAATCAGTGAAGGTGAAATCCTCGGTTATCTATACTCCAAGGGGATTAAACCAGATGGGGTGCAAACTCTAGACAAAGATATGGTGAAGATGATTTGTAAAGAGCAAGGTGTGGAAGTCATAGATGCCGATCCTGTCAGAGTTGAAGGATTGGTGAAGAAAAGGGAAATTCTAGATGAAGATGATCTCGACAAACTCAAAGATAGGCCTCCTGTTATTACTATCATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGACCATATTCGGAAGAGCAAGGTAGCGGCTTCAGAAGCTGGTGGGATTACACAAGGAATTGGGGCATATAGAGTTCAAGTTCCTGTTGATGGCAAATTGCTGCCTTGTGTTTTTCTTGACACACCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGAGGAGCAAGTGTAACAGATATTGCCATCGTTGTCGTAGCTGCTGATGATGGAATTCGTCCTCAAACAAACGAAGCCATTGCACATGCCAAAGCAGCAGAAGTACCCATAATTATCGCTATGAACAAGATAGATAAAGATGGAGCAAATCCTGACCGAGTCATGCAAGAGCTATCTTCAATTGGTCTAATGCCTGAAGACTGGGGTGGTGACATCCCAATGGTTCAGATAAGCGCTCTTAAAGGGGAGAATGTAGATGATCTTTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCAAATCCTGATAGAAGTGCGAAGGGCACAGTCATTGAGGCTGGTCTGGATAAATCAAAAGGACCATTTGCTACTTTTATAGTGCAGAATGGCACCCTTAAAAGGGGAGACGTAGTAGTTTGTGGAGAAGCTTTTGGGAAGGTGCGGGCTTTATTTGATGATGTTGGAAAACGTGTCGATTCAGCTGCACCCTCTATACCTGTACAGGTTATTGGATTGAATAGTGTTCCAATTGCCGGTGATGAATTTGAGGTTATTAACTCCCTTGATGCTGCCCGTGAAAAGGCAGAGTCTCGCGCTGAATCATTGAGAAATGAGCGTATTTCAGCTAAGGCTGGGGATGGGAAGGTCACACTTTCCTCTTTAGCTTCTGCAGTTTCGTCAGGAAGGCTTTCTGGATTAGACTTGCACCAACTAAACATTATCTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTATCAGACAAGCCCTACAGGTGCTACCACAAGATAATGTCACCTTGAAGTTTTTGTTGGAAGCAACTGGTGATGTTAGCACCAGTGATGTTGACCTTGCAGTTGCAAGCAAAGCTATTATTTTGGGATTTAATGTCAGAGTACCGGGTTCTGTAAAAAGCCACGCAGAGAATAAGTTGGTGGAGATTAGATCATATAAAGTTATTTATGACCTAATTGATGATGTGAGGAATGCAATGGAAGGACTTCTGGAGCCCGTGGAGGATCAAGTAACGATTGGCTCAGCTGAAGTAAGAGCCACGTTCAGCAGTGGTAGTGGTCGTGTTGCCGGATGCATGGTTAATGAGGGAAAAGTAACGAAAGACTGTGGCATTCGAGTCACTCGTAAGGGAAAGGTTGTTCATGTTGGAGTGCTTGATTCTTTGAGACGGGTGAAGGAGAGTGTGAAGGAGGTAAGTGCTGGTCTAGAGTGTGGGATTGGTTTAGAAGATTACGATGACTGGGAAGAAGGAGATATTATCGAGGCGTTCAACACTGTTCAGAAGAAGCGGACCCTTGAAGAGGCATCAGCTTCAATGGCTGCAGCAGTGGAAGGAGTAGGAGTATAG 3042 0.4464 MYIMVGNVQGAMAYLASPVSLGGLVGVSSSGRTHSIGRRVSLSGGNFEGRRTWHCISLSLCRYSVTTTDFIPDQGNSVSLDSNSDRGSTGTGDNNAGFVLKPPPKPVLKSSETMGNSVLGASSEGWDPSKAKQFGNEKLDDVEERNKVIESLGEVLEKAEKLENSKFDGKRNNGPVSKRAMSNTTTNPKTDELANSTTNQQSRTVKSVWRKGDSIANVKKVAKETPKPKTKNGGEKYQTGGGGKVAFQPPTPPRAPQPLLQAKPAVAPPPVKKPVLKDNGAAGTSVKDKERKGPILIDKFASKKPVVDPLIAQAVLAPTKPGKGPPPGKFKVDYRKKGSPTGGPRRRVLDDDVEPDEDTSELDVSIPGAATARKGRKWSKASRKAARLQAAKEAAPVKVEILEVSDKGMLIEELAYHLAISEGEILGYLYSKGIKPDGVQTLDKDMVKMICKEQGVEVIDADPVRVEGLVKKREILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDHIRKSKVAASEAGGITQGIGAYRVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDIAIVVVAADDGIRPQTNEAIAHAKAAEVPIIIAMNKIDKDGANPDRVMQELSSIGLMPEDWGGDIPMVQISALKGENVDDLLETVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDVVVCGEAFGKVRALFDDVGKRVDSAAPSIPVQVIGLNSVPIAGDEFEVINSLDAAREKAESRAESLRNERISAKAGDGKVTLSSLASAVSSGRLSGLDLHQLNIILKVDLQGSIEAIRQALQVLPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVRVPGSVKSHAENKLVEIRSYKVIYDLIDDVRNAMEGLLEPVEDQVTIGSAEVRATFSSGSGRVAGCMVNEGKVTKDCGIRVTRKGKVVHVGVLDSLRRVKESVKEVSAGLECGIGLEDYDDWEEGDIIEAFNTVQKKRTLEEASASMAAAVEGVGV 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0527 1013 MobiDBLite consensus disorder prediction 74 111 - -
Lele11g0527 1013 MobiDBLite consensus disorder prediction 317 362 - -
Lele11g0527 1013 SUPERFAMILY Translation proteins 901 995 IPR009000 -
Lele11g0527 1013 CDD IF2_mtIF2_II 666 760 IPR044145 -
Lele11g0527 1013 FunFam Translation initiation factor IF-2 483 661 - -
Lele11g0527 1013 Pfam Translation-initiation factor 2 794 887 IPR023115 -
Lele11g0527 1013 MobiDBLite consensus disorder prediction 74 95 - -
Lele11g0527 1013 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 171 1003 IPR015760 -
Lele11g0527 1013 ProSitePatterns Initiation factor 2 signature. 948 970 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele11g0527 1013 MobiDBLite consensus disorder prediction 216 231 - -
Lele11g0527 1013 MobiDBLite consensus disorder prediction 329 353 - -
Lele11g0527 1013 Hamap Translation initiation factor IF-2 [infB]. 7 995 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele11g0527 1013 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 793 905 IPR036925 -
Lele11g0527 1013 MobiDBLite consensus disorder prediction 166 293 - -
Lele11g0527 1013 Pfam Elongation factor Tu GTP binding domain 491 651 IPR000795 GO:0003924|GO:0005525
Lele11g0527 1013 CDD IF2_eIF5B 489 655 - -
Lele11g0527 1013 Coils Coil 745 772 - -
Lele11g0527 1013 Gene3D Translation factors 900 996 - -
Lele11g0527 1013 FunFam Translation initiation factor IF-2 794 899 - -
Lele11g0527 1013 TIGRFAM IF-2: translation initiation factor IF-2 408 997 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele11g0527 1013 CDD mtIF2_IVc 905 987 - -
Lele11g0527 1013 FunFam Translation initiation factor IF-2 662 780 - -
Lele11g0527 1013 SUPERFAMILY Translation proteins 662 745 IPR009000 -
Lele11g0527 1013 MobiDBLite consensus disorder prediction 249 271 - -
Lele11g0527 1013 Gene3D Translation factors 662 778 - -
Lele11g0527 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 662 IPR027417 -
Lele11g0527 1013 Gene3D - 483 661 IPR027417 -
Lele11g0527 1013 MobiDBLite consensus disorder prediction 176 208 - -
Lele11g0527 1013 FunFam Translation initiation factor IF-2 899 996 - -
Lele11g0527 1013 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 486 659 IPR000795 GO:0003924|GO:0005525
Lele11g0527 1013 Gene3D - 794 898 IPR036925 -
Lele11g0527 1013 PRINTS GTP-binding elongation factor signature 542 552 IPR000795 GO:0003924|GO:0005525
Lele11g0527 1013 PRINTS GTP-binding elongation factor signature 490 503 IPR000795 GO:0003924|GO:0005525
Lele11g0527 1013 PRINTS GTP-binding elongation factor signature 558 569 IPR000795 GO:0003924|GO:0005525
Lele11g0527 1013 PRINTS GTP-binding elongation factor signature 594 603 IPR000795 GO:0003924|GO:0005525
Lele11g0527 1013 TIGRFAM small_GTP: small GTP-binding protein domain 488 649 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0527 Lele-ChrLele11 5219898 5230934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0527 468 885 Eukaryotic Initiation Factors Gene Family AT1G76810 29.388 6.21e-29 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0527 11 5219898 5230934 Lele11g0527 11 5219898 5230934 ECH
Lele09g0522 09 3875447 3882076 Lele11g0527 11 5219898 5230934 hybridization
Lele10g0486 10 3460819 3467419 Lele11g0527 11 5219898 5230934 hybridization