Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0521 ATGGAACTTCATTGCGCAAAAGTTAAGTTAAATGAAGTGGATCACAAGTCAAACGCGTGGCCTGCAATAGTATGGTTAATCCCAATTTCATTACTCTGTCTGGTCATCATGACGTCTTGTTTTTCTTTCTTATTTGGTAGGAAGGTTACACCTCCAGTGATAGGAGATCCTGAAATTGACGAAGAATTATCAGGGGTTCACAATCTTACTCTTTATGCCTACAAAGAATTAAGTATTGCCACTGAGGATTTCAGTCCGGCCAACAAAATTGGAGAGGGAGGCTTTGGTTCCGTCTATAAGGGAAAGCTAAAAGATGGAAAAATTGCTGCTATCAAAGTCCTTGCAGCTGAGTCAAGTCAAGGGGTGAATGAATTCTTGACAGAAATCAAAGTGATCTCAGAAGTAGAGCATGAAAATTTAGTTAAGTTATATGGCTGTTGTGTGGAAGGCAATCACAGAATCGTAGTCTACAATTACCTTGAGAATAACAGTCTTGCACAGACACTTCTAGGTGGACGTCACAGCAATATTTTCTTCAACTGGCAAACACGGACTAGAATGTGCATTGGGATTGCCCGTGGGCTTGCCTTTCTTCATGAGGGAGTAAAACCGCATATTGTTCATAGGGATATAAAAGCAAGCAACATTCTCCTTGACAAAGACCTTACACCAAAGATTTCAGATTTTGGGCTCGCAAAACTTATCCCCCCAAACATGACTCATGTCAGCACACGTGTGGCAGGAACAATAGGTTATCTGGCACCTGAATATGCGGTAAGAGGGCAGGTTAATAGAAAAGCAGACATTTACAGTTTTGGTGTACTTCTTTTGGAGATTGTCAGTGGGAGATCTAATACAAATACACGATTGCCAGCGGAAGAACAATACCTTCTAGAAAGGACATGGAGCCATTATCAGCAAAGGATATTGGTAGGGTTGGTAGACACATCACTAAATGGGGAATTCGATGCCGAGGAAGCTTGCAAGTTTCTGAAAGTTGGCCTTCTTTGTACTCAGCGAGTTCCGAAACTCCGGCCATCCATGTCTACAGTGGTCGAGATGCTCACCGGTAAAATGGATGTCGATGACAGTAAGATAACAGAACCAGGCTTGATTTCTGACTTCATGGACCTTAAAGTTGGACGAAAACCAAGAAATGAAGTTGATACGAAGACATTATCTTCATATAATGCAACCTCTGCCTCAGACAACCCGGACACTACGATGTCATCGATGGCTTCAACCGTTGCTACTACAACGTTCGCCACAACCTTTGCCACACAATATGATCGTAGCATGTATATAGAATATCAGCCTCAATCCCTATCACTCAGTAAACAATTGGAAAATGGTGGCGACCGGCGATTTCTTTCTGAAAGGAACGATGTGCAATCCCTGAACAAGATAGAGCCAATGTTACTGGTTTCTAGCCCCAGCCAAAGGAAAGATTCTCCGCATTACCCTTTAGGAATCTGTCAAACGCCTTCTTGTTTCTGGGTCTATGAGAAGGTTTTGGTGATGGAGGATATAGGTTTGTTTAAACAAGGTTGGCAATGGCTTCGATCGCAGAAGGATGCTTACTGGCGTGCCCGAGCCGCGTTGAGTTGTTGCAGGGACAAAACTGCCGTGTTCATCGAGCAACATTGGCCGTTAGTATGCAGTGCTTGCTTCAGATTGGGAAGCATTCTTCGCCTATCGTTGCTTTATTGGAAAGAATGTTTTGTGAGGGGCTTTCAGTCGTTCATCAAGCTGGGTCCAGCTATGCTTCTCCTCATAATGTGGTGTTGTCTTCTTAGTTTGACCTCGATGCATTGCTTGATTTATGTACTTATTAGTATGGGTGTTGCTGGAGCTGCTGTTCAGTACTTGGGTTATACTCCTGGCATCTTCATTGTAGGGCTTTTTGCTATCCTTATGTTGTGGATGTATGCTAACTTCTGGATAACAGGAACATTGCTTATTGTTGGAGGTTATTTATTTTCCCTAAATCATGCACGCTTGGTGGTACTAATGGCAACCGTGTATGCTTTATACTGTGTCAAAGTTCAAGTTGGATGGCTCGGTGTTTTTCTGTGTGTAAACCTTGCATTCTTGTCCAACGACATTTTGAATTTCCTCCTCCAATGGTTTGATAATGTGAGTGAAAGCAGCTCACATTCTGAAGACCAGAGACAAGCAGAAACAGTTCTGGGAGATGACTTTACTGAAGAGTGTGAATATCCCATTCCTTCTGCTGAATCTGAAAATTCACATTCATGTAAATCATCCAGCAAACCTGCTATTACCACTTCAGTTGTTGAAAACAAGAAAGAGTTTTCAGATAGCAAAGTGGTGAAAGTACAAGCAGATTCTGTTGATGAAATGAGGAGAATATTGAATAGTCTTGATCATTATGATGCGCTTGGATTTCCCCGTCACAAGAAAGTTGATGCAGCAATTTTGAAAAAGGAATACCGGAAAAAGGCGATGCTTGTTCATCCTGATAAGAATATGGGCAGTCCGCTGGCAAGTGAATCATTTAAGAAGCTTCAATGTGCATATGAGGTTCTTTCTGATACCCCAAAGAAGAGAGACTATGATGAGCAATTGAGGAAAGAGGAATTCAGGGCTAAAAGTGTCTGCCAGAAATCCTATGGTGCTTCACGTCAGGGCAATTCTGATTATCGCTCTGAAGAATCCAGGCGTATACAGTGCACCAAGTGTGGCAATTCACATGTATGGGTATGCACTAATAGAATTAAGTCGAAGGCAAGATGGTGTCAGGACTGTTGTCAGTATCATCAAGCCAAGGATGGAGATGGATGGGTTGAGTACAAAGGTTCTCTGGCTTTTGAGAGGGCTCAAAAGATGGAGATTCCACGCGCTTTTGTTTGTGCGGAGAGCAAGATCTTTGATGTATCAGAATGGGCCATTTGTCAGGGAATGGCTTGTAGGCCAAACACCCATAGACCGAGCTTCCATGTGAACATGGTTGGCCTGGAGAAAAGCCCGCGATGTAACTCCAGCCGGTATCCATGGGATTTGGATGCCGAAATGATGCTCGACGAAGATGAAGAGGCATTTGAGCTTTGGCTTCAGCAGGCTCTCGCCTCTGGCCTCTTCTGTGAGACCTCCAAACGCCGGAAGAGCTGGAGTCCCTTCAAATTGCATCAGAAGAAAGGGAAGAAGCAGTGGCGAAGAACATCATGCTGA 3192 0.4336 MELHCAKVKLNEVDHKSNAWPAIVWLIPISLLCLVIMTSCFSFLFGRKVTPPVIGDPEIDEELSGVHNLTLYAYKELSIATEDFSPANKIGEGGFGSVYKGKLKDGKIAAIKVLAAESSQGVNEFLTEIKVISEVEHENLVKLYGCCVEGNHRIVVYNYLENNSLAQTLLGGRHSNIFFNWQTRTRMCIGIARGLAFLHEGVKPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPPNMTHVSTRVAGTIGYLAPEYAVRGQVNRKADIYSFGVLLLEIVSGRSNTNTRLPAEEQYLLERTWSHYQQRILVGLVDTSLNGEFDAEEACKFLKVGLLCTQRVPKLRPSMSTVVEMLTGKMDVDDSKITEPGLISDFMDLKVGRKPRNEVDTKTLSSYNATSASDNPDTTMSSMASTVATTTFATTFATQYDRSMYIEYQPQSLSLSKQLENGGDRRFLSERNDVQSLNKIEPMLLVSSPSQRKDSPHYPLGICQTPSCFWVYEKVLVMEDIGLFKQGWQWLRSQKDAYWRARAALSCCRDKTAVFIEQHWPLVCSACFRLGSILRLSLLYWKECFVRGFQSFIKLGPAMLLLIMWCCLLSLTSMHCLIYVLISMGVAGAAVQYLGYTPGIFIVGLFAILMLWMYANFWITGTLLIVGGYLFSLNHARLVVLMATVYALYCVKVQVGWLGVFLCVNLAFLSNDILNFLLQWFDNVSESSSHSEDQRQAETVLGDDFTEECEYPIPSAESENSHSCKSSSKPAITTSVVENKKEFSDSKVVKVQADSVDEMRRILNSLDHYDALGFPRHKKVDAAILKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYEVLSDTPKKRDYDEQLRKEEFRAKSVCQKSYGASRQGNSDYRSEESRRIQCTKCGNSHVWVCTNRIKSKARWCQDCCQYHQAKDGDGWVEYKGSLAFERAQKMEIPRAFVCAESKIFDVSEWAICQGMACRPNTHRPSFHVNMVGLEKSPRCNSSRYPWDLDAEMMLDEDEEAFELWLQQALASGLFCETSKRRKSWSPFKLHQKKGKKQWRRTSC 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0521 1063 ProSiteProfiles dnaJ domain profile. 796 863 IPR001623 -
Lele11g0521 1063 CDD DnaJ 796 852 IPR001623 -
Lele11g0521 1063 Gene3D Transferase(Phosphotransferase) domain 1 160 368 - -
Lele11g0521 1063 Pfam Protein kinase domain 87 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0521 1063 PANTHER OS03G0832900 PROTEIN 503 1058 - -
Lele11g0521 1063 Pfam DnaJ domain 796 860 IPR001623 -
Lele11g0521 1063 PRINTS DnaJ domain signature 818 833 IPR001623 -
Lele11g0521 1063 PRINTS DnaJ domain signature 835 855 IPR001623 -
Lele11g0521 1063 Gene3D DnaJ domain 782 882 IPR036869 -
Lele11g0521 1063 ProSitePatterns Protein kinases ATP-binding region signature. 90 112 IPR017441 GO:0005524
Lele11g0521 1063 FunFam cold-responsive protein kinase 1 56 159 - -
Lele11g0521 1063 FunFam cold-responsive protein kinase 1 160 371 - -
Lele11g0521 1063 CDD STKc_IRAK 90 357 - -
Lele11g0521 1063 SMART dnaj_3 795 855 IPR001623 -
Lele11g0521 1063 Gene3D Phosphorylase Kinase; domain 1 56 159 - -
Lele11g0521 1063 ProSitePatterns Nt-dnaJ domain signature. 840 859 IPR018253 -
Lele11g0521 1063 ProSiteProfiles Protein kinase domain profile. 84 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0521 1063 SUPERFAMILY Chaperone J-domain 771 859 IPR036869 -
Lele11g0521 1063 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Lele11g0521 1063 SMART serkin_6 84 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele11g0521 1063 Pfam Cleavage inducing molecular chaperone 892 989 IPR032843 -
Lele11g0521 1063 SUPERFAMILY Protein kinase-like (PK-like) 65 356 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0521 Lele-ChrLele11 5176123 5188749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0521 507 1062 Miscellaneous Gene Families AT1G16680 69.767 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele11g0521 Pkinase 5.1e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0516 09 3838322 3844043 Lele11g0521 11 5176123 5188749 hybridization
Lele10g0481 10 3410514 3416411 Lele11g0521 11 5176123 5188749 hybridization