Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0518 ATGAGCAACATAAGCATGGTAGAGGCAAAGTTGCCTCCTGGGTTCAGGTTTCATCCCAGAGATGAAGAACTTGTATGCGATTACTTAATGAAGAAGGTGACACACTGTGACTCCTCGCTCATGATTGATGTGGATCTTAACAAGTGCGAACCATGGGACATTCCTGAGGCAGCATGTGTAGGAGGGAAAGAGTGGTATTTCTACACGCAGCGAGACCGCAAGTATGCGACTGGCCTACGCACCAATCGTGCCACTGCCTCAGGCTATTGGAAGGCCACAGGGAAGGACAGGCCTATCCTTCGCAAGGGCACCCTTGTCGGTATGAGGAAGACTTTGGTGTTCTATCAAGGAAGAGCACCAAAAGGGAGAAAAACCGAATGGGTCATGCACGAGTTTCGCCTTGAAGGTCCCCTTGGCCCTCCTAAACTTTCTTCAGCCAAGGAGGATTGGGTTCTGTGCAGGGCGTTCCTAAAAAACAGAGAATCTTCAGCGAAACAGAGCAGCGGAAGCTGCTACGACGACACAGGATCTTCATCTCTACCTGCATTAATGGATTCTTACATCAGTTTCGACCAACAGGCTCAAGCTCAAACTCATCAAGATGACTACGAGCAAGTGCCCTGCTTCTCCATTTTCTCGCAGATCCATACAAACCCTAGCTTCAACCACACAAACAGTACAAGCATCATGGAGCCAAATTTAGTAGTACCTGTCAAGAACCACCACAATGTGACCACCACATACGGCGGAGGACCGACGCCGTACGATCTGGATTCTTCTTGCTTGGAACCTAATTTGAATTTCGACGGTGATAGTAGGAAGGTATTGAGAGCTTTCGTGGATCAGTTCACAAAGATTGAGAGAAATCAACAAAGCCAAATTACTACTCTCAAAGGTTCACCAAGCTTAGGGGAAGCAAGTTCTGAGAGTTTTTTATCTGACGTGTGTATGCCCAACTTGTGGAACAATTTCTGA 975 0.4738 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHCDSSLMIDVDLNKCEPWDIPEAACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGPLGPPKLSSAKEDWVLCRAFLKNRESSAKQSSGSCYDDTGSSSLPALMDSYISFDQQAQAQTHQDDYEQVPCFSIFSQIHTNPSFNHTNSTSIMEPNLVVPVKNHHNVTTTYGGGPTPYDLDSSCLEPNLNFDGDSRKVLRAFVDQFTKIERNQQSQITTLKGSPSLGEASSESFLSDVCMPNLWNNF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0518 324 SUPERFAMILY NAC domain 2 158 IPR036093 GO:0003677|GO:0006355
Lele11g0518 324 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Lele11g0518 324 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Lele11g0518 324 FunFam NAC domain-containing protein 100-like 20 162 - -
Lele11g0518 324 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Lele11g0518 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0518 Lele-ChrLele11 5154151 5158177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g0518 2 322 NAC Transcription Factor Family AT1G56010 58.133 2.81e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele11g0518 NAM 1.9e-36 No_clan